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蜡状芽孢杆菌群基因组与枯草芽孢杆菌的比较基因组分析。

Comparative genome analysis of Bacillus cereus group genomes with Bacillus subtilis.

作者信息

Anderson Iain, Sorokin Alexei, Kapatral Vinayak, Reznik Gary, Bhattacharya Anamitra, Mikhailova Natalia, Burd Henry, Joukov Victor, Kaznadzey Denis, Walunas Theresa, Larsen Niels, Pusch Gordon, Liolios Konstantinos, Grechkin Yuri, Lapidus Alla, Goltsman Eugene, Chu Lien, Fonstein Michael, Ehrlich S Dusko, Overbeek Ross, Kyrpides Nikos, Ivanova Natalia

机构信息

Integrated Genomics, 2201 W. Campbell Park Dr., Chicago, IL 60612, USA.

出版信息

FEMS Microbiol Lett. 2005 Sep 15;250(2):175-84. doi: 10.1016/j.femsle.2005.07.008.

Abstract

Genome features of the Bacillus cereus group genomes (representative strains of Bacillus cereus, Bacillus anthracis and Bacillus thuringiensis sub spp. israelensis) were analyzed and compared with the Bacillus subtilis genome. A core set of 1381 protein families among the four Bacillus genomes, with an additional set of 933 families common to the B. cereus group, was identified. Differences in signal transduction pathways, membrane transporters, cell surface structures, cell wall, and S-layer proteins suggesting differences in their phenotype were identified. The B. cereus group has signal transduction systems including a tyrosine kinase related to two-component system histidine kinases from B. subtilis. A model for regulation of the stress responsive sigma factor sigmaB in the B. cereus group different from the well studied regulation in B. subtilis has been proposed. Despite a high degree of chromosomal synteny among these genomes, significant differences in cell wall and spore coat proteins that contribute to the survival and adaptation in specific hosts has been identified.

摘要

分析了蜡样芽孢杆菌属基因组(蜡样芽孢杆菌、炭疽芽孢杆菌和苏云金芽孢杆菌以色列亚种的代表性菌株)的基因组特征,并与枯草芽孢杆菌基因组进行了比较。在这四个芽孢杆菌基因组中鉴定出了一组由1381个蛋白质家族组成的核心集,蜡样芽孢杆菌属还共有另外933个家族。发现了信号转导途径、膜转运蛋白、细胞表面结构、细胞壁和S层蛋白的差异,表明它们的表型存在差异。蜡样芽孢杆菌属具有信号转导系统,包括一种与枯草芽孢杆菌双组分系统组氨酸激酶相关的酪氨酸激酶。有人提出了蜡样芽孢杆菌属中应激反应σ因子σB的调控模型,该模型与枯草芽孢杆菌中经过充分研究的调控模型不同。尽管这些基因组之间存在高度的染色体共线性,但已确定细胞壁和芽孢衣蛋白存在显著差异,这些差异有助于在特定宿主中的存活和适应。

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