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日本鼩鼱鼹(Dymecodon pilirostris)和长尾鼩鼹(Urotrichus talpoides)的核型进化及高度重复DNA序列的组织

Karyotypic evolution and organization of the highly repetitive DNA sequences in the Japanese shrew-moles, Dymecodon pilirostris and Urotrichus talpoides.

作者信息

Nakata A, Yoshimura A, Kuro-o M, Obara Y

机构信息

Department of Biofunctional Science, Faculty of Agriculture and Life Science, Hirosaki University, Hirosaki, Japan.

出版信息

Cytogenet Genome Res. 2005;111(2):152-8. doi: 10.1159/000086385.

Abstract

The karyological relationship and organization of highly repetitive DNA sequences in Japanese shrew-moles were studied by zoo-blot hybridization and fluorescence in situ hybridization (FISH). When the genomic DNA of the eastern race of Urotrichus talpoides was digested with PstI, three fragments of highly repetitive DNA sequences, approximately 0.7, 0.9, and 1.4 kb in length, were observed as distinct bands. The results of FISH in the eastern race of U. talpoides using these three fragments separately as probes showed that the 0.7-kb PstI fragment was distributed in the centromeric regions of most chromosomes, and that the 0.9- and 1.4-kb fragments were predominantly located in the C-heterochromatin region of chromosome 13p. Although the western race of U. talpoides also had three PstI fragments, 0.9- and 1.4-kb PstI fragments were more ambiguous than those of the eastern race. The PstI- digested genomic DNA in Dymecodonpilirostris produced only a faint 0.9-kb band, and its signal patterns obtained by zoo-blot hybridization were clearly different from those of U. talpoides. The 0.7-kb fragment of U. talpoides hybridized strongly with the 0.9-kb fragment of D. pilirostris. In a FISH analysis, the 0.9-kb fragment of D. pilirostris hybridized with highly repetitive DNA in the centromeric regions of most chromosomes from both D. pilirostris and U. talpoides. Zoo-blot hybridization and FISH analyses suggest that the 0.9- and 1.4-kb PstI fragments were generated specifically in the genome of U. talpoides after the common ancestor differentiated into two extant shrew-mole species. A difference in the length of the centromeric elements between U. talpoides and D. pilirostris might be observed due to certain modifications of the repeating unit.

摘要

通过动物印迹杂交和荧光原位杂交(FISH)技术,对日本鼩鼹的核型关系及高度重复DNA序列的组织进行了研究。当用PstI消化长尾鼩鼹东部种群的基因组DNA时,观察到三个长度分别约为0.7、0.9和1.4 kb的高度重复DNA序列片段,呈现为明显的条带。以这三个片段分别作为探针,对长尾鼩鼹东部种群进行FISH分析的结果表明,0.7 kb的PstI片段分布于大多数染色体的着丝粒区域,而0.9 kb和1.4 kb的片段主要位于13号染色体短臂的C-异染色质区域。尽管长尾鼩鼹西部种群也有三个PstI片段,但0.9 kb和1.4 kb的PstI片段比东部种群的更为模糊。毛吻鼩鼹经PstI消化的基因组DNA仅产生一条微弱的0.9 kb条带,并通过动物印迹杂交获得的信号模式与长尾鼩鼹明显不同。长尾鼩鼹的0.7 kb片段与毛吻鼩鼹的0.9 kb片段强烈杂交。在FISH分析中,毛吻鼩鼹的0.9 kb片段与毛吻鼩鼹和长尾鼩鼹大多数染色体着丝粒区域的高度重复DNA杂交。动物印迹杂交和FISH分析表明,在共同祖先分化为两种现存鼩鼹物种后,0.9 kb和1.4 kb的PstI片段是在长尾鼩鼹的基因组中特异性产生的。由于重复单元的某些修饰,可能会观察到长尾鼩鼹和毛吻鼩鼹着丝粒元件长度的差异。

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