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沿着反应坐标的MTA/腺苷高半胱氨酸核苷酶的结构快照为催化过程中酶和核苷的灵活性提供了见解。

Structural snapshots of MTA/AdoHcy nucleosidase along the reaction coordinate provide insights into enzyme and nucleoside flexibility during catalysis.

作者信息

Lee Jeffrey E, Smith G David, Horvatin Cathy, Huang David J T, Cornell Kenneth A, Riscoe Michael K, Howell P Lynne

机构信息

Structural Biology and Biochemistry, Research Institute, Hospital for Sick Children, 555 University Avenue, Toronto, Ont., Canada.

出版信息

J Mol Biol. 2005 Sep 23;352(3):559-74. doi: 10.1016/j.jmb.2005.07.027.

Abstract

MTA/AdoHcy nucleosidase (MTAN) irreversibly hydrolyzes the N9-C1' bond in the nucleosides, 5'-methylthioadenosine (MTA) and S-adenosylhomocysteine (AdoHcy) to form adenine and the corresponding thioribose. MTAN plays a vital role in metabolic pathways involving methionine recycling, biological methylation, polyamine biosynthesis, and quorum sensing. Crystal structures of a wild-type (WT) MTAN complexed with glycerol, and mutant-enzyme and mutant-product complexes have been determined at 2.0A, 2.0A, and 2.1A resolution, respectively. The WT MTAN-glycerol structure provides a purine-free model and in combination with the previously solved thioribose-free MTAN-ADE structure, we now have separate apo structures for both MTAN binding subsites. The purine and thioribose-free states reveal an extensive enzyme-immobilized water network in their respective binding subsites. The Asp197Asn MTAN-MTA and Glu12Gln MTAN-MTR.ADE structures are the first enzyme-substrate and enzyme-product complexes reported for MTAN, respectively. These structures provide representative snapshots along the reaction coordinate and allow insight into the conformational changes of the enzyme and the nucleoside substrate. A "catalytic movie" detailing substrate binding, catalysis, and product release is presented.

摘要

MTA/腺苷高半胱氨酸核苷酶(MTAN)不可逆地水解核苷5'-甲硫基腺苷(MTA)和S-腺苷高半胱氨酸(AdoHcy)中的N9-C1'键,形成腺嘌呤和相应的硫代核糖。MTAN在涉及甲硫氨酸循环利用、生物甲基化、多胺生物合成和群体感应的代谢途径中起着至关重要的作用。已分别以2.0埃、2.0埃和2.1埃的分辨率测定了与甘油复合的野生型(WT)MTAN以及突变酶和突变产物复合物的晶体结构。WT MTAN-甘油结构提供了一个无嘌呤模型,结合之前解析的无硫代核糖的MTAN-ADE结构,我们现在拥有了MTAN两个结合亚位点的单独无配体结构。无嘌呤和无硫代核糖状态在其各自的结合亚位点揭示了广泛的酶固定化水网络。Asp197Asn MTAN-MTA和Glu12Gln MTAN-MTR.ADE结构分别是首次报道的MTAN的酶-底物和酶-产物复合物。这些结构提供了沿反应坐标的代表性快照,并有助于深入了解酶和核苷底物的构象变化。本文展示了一部详细描述底物结合、催化和产物释放的“催化动态影片”。

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