Mitra Ananya, Tascione Richard, Auerbach Anthony, Licht Stuart
Center for Single Molecule Biophysics and the Department of Physiology and Biophysics, The State University of New York, Buffalo, NY, USA.
Biophys J. 2005 Nov;89(5):3071-8. doi: 10.1529/biophysj.105.068783. Epub 2005 Aug 19.
Like other protein conformational changes, ion channel gating requires the protein to achieve a high-energy transition-state structure. It is not known whether ion channel gating takes place on a broad energy landscape on which many alternative transition state structures are accessible, or on a narrow energy landscape where only a few transition-state structures are possible. To address this question, we measured how rate-equilibrium free energy relationships (REFERs) for di-liganded and unliganded acetylcholine receptor gating vary as a function of the gating equilibrium constant. A large slope for the REFER plot indicates an openlike transition state, whereas a small slope indicates a closedlike transition state. Due to this relationship between REFERs and transition-state structure, the sensitivity of the REFER slope to mutation-induced energetic perturbations allows estimation of the breadth of the energy landscape underlying gating. The relatively large sensitivity of di-liganded REFER slopes to energetic perturbations suggests that the motions underlying di-liganded gating take place on a broad, shallow energy landscape where many alternative transition-state structures are accessible.
与其他蛋白质构象变化一样,离子通道门控需要蛋白质达到高能过渡态结构。目前尚不清楚离子通道门控是发生在一个广阔的能量景观上,在该景观上许多替代过渡态结构都是可及的,还是发生在一个狭窄的能量景观上,在该景观上只有少数过渡态结构是可能的。为了解决这个问题,我们测量了双配体和未配体乙酰胆碱受体会发生门控时,速率平衡自由能关系(REFERs)如何随门控平衡常数而变化。REFER图的大斜率表明类似开放的过渡态,而小斜率表明类似关闭的过渡态。由于REFERs与过渡态结构之间存在这种关系,REFER斜率对突变诱导的能量扰动的敏感性使得能够估计门控背后能量景观的广度。双配体REFER斜率对能量扰动的相对较大敏感性表明,双配体门控背后的运动发生在一个广阔且浅的能量景观上,在该景观上许多替代过渡态结构都是可及的。