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1
Structure of stochastic dynamics near fixed points.
Proc Natl Acad Sci U S A. 2005 Sep 13;102(37):13029-33. doi: 10.1073/pnas.0506347102. Epub 2005 Sep 1.
2
Nonequilibrium steady state of a stochastic system driven by a nonlinear drift force.
Phys Rev E Stat Nonlin Soft Matter Phys. 2011 Dec;84(6 Pt 1):061106. doi: 10.1103/PhysRevE.84.061106. Epub 2011 Dec 5.
3
Analysis of stochastic bifurcations with phase portraits.
PLoS One. 2018 Apr 24;13(4):e0196126. doi: 10.1371/journal.pone.0196126. eCollection 2018.
4
Poissonian steady states: from stationary densities to stationary intensities.
Phys Rev E Stat Nonlin Soft Matter Phys. 2012 Oct;86(4 Pt 1):041140. doi: 10.1103/PhysRevE.86.041140. Epub 2012 Oct 22.
5
Population extinction and quasi-stationary behavior in stochastic density-dependent structured models.
Bull Math Biol. 2000 Mar;62(2):199-228. doi: 10.1006/bulm.1999.0147.
6
Time reversibility and nonequilibrium thermodynamics of second-order stochastic processes.
Phys Rev E Stat Nonlin Soft Matter Phys. 2014 Feb;89(2):022127. doi: 10.1103/PhysRevE.89.022127. Epub 2014 Feb 21.
7
Descending from infinity: convergence of tailed distributions.
Phys Rev E Stat Nonlin Soft Matter Phys. 2015 Jan;91(1):012128. doi: 10.1103/PhysRevE.91.012128. Epub 2015 Jan 15.
8
Diffusive motion with nonlinear friction: apparently Brownian.
J Chem Phys. 2010 Jul 14;133(2):024702. doi: 10.1063/1.3460530.
9
Brownian motion and diffusion: from stochastic processes to chaos and beyond.
Chaos. 2005 Jun;15(2):26102. doi: 10.1063/1.1832773.
10
Disorder induced diffusive transport in ratchets.
Phys Rev Lett. 2000 Oct 9;85(15):3321-4. doi: 10.1103/PhysRevLett.85.3321.

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Deciphering the topological landscape of glioma using a network theory framework.
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Analyzing asymmetry in brain hierarchies with a linear state-space model of resting-state fMRI data.
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Nonreciprocal forces enable cold-to-hot heat transfer between nanoparticles.
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Topology, vorticity, and limit cycle in a stabilized Kuramoto-Sivashinsky equation.
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Memory and Markov Blankets.
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A Technical Critique of Some Parts of the Free Energy Principle.
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The inverse variance-flatness relation in stochastic gradient descent is critical for finding flat minima.
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Modules or Mean-Fields?
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Inferring What to Do (And What Not to).
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本文引用的文献

1
Calculating biological behaviors of epigenetic states in the phage lambda life cycle.
Funct Integr Genomics. 2004 Jul;4(3):188-95. doi: 10.1007/s10142-003-0095-5. Epub 2004 Feb 5.
2
Dynamic importance sampling for the escape problem in nonequilibrium systems: observation of shifts in optimal paths.
Phys Rev Lett. 2004 Jan 16;92(2):020601. doi: 10.1103/PhysRevLett.92.020601. Epub 2004 Jan 14.
3
Extending the definition of entropy to nonequilibrium steady states.
Proc Natl Acad Sci U S A. 2003 Mar 18;100(6):3054-8. doi: 10.1073/pnas.0630567100. Epub 2003 Mar 10.
4
Stochastic gene expression as a many-body problem.
Proc Natl Acad Sci U S A. 2003 Mar 4;100(5):2374-9. doi: 10.1073/pnas.2627987100. Epub 2003 Feb 26.
5
How an anomalous cusp bifurcates in a weak-noise system.
Phys Rev Lett. 2000 Aug 14;85(7):1358-61. doi: 10.1103/PhysRevLett.85.1358.

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