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组氨酸二肽中化学位移和氢键的固态¹³C核磁共振、晶体学及量子化学研究。

A solid state 13C NMR, crystallographic, and quantum chemical investigation of chemical shifts and hydrogen bonding in histidine dipeptides.

作者信息

Cheng Feng, Sun Haihong, Zhang Yong, Mukkamala Dushyant, Oldfield Eric

机构信息

Department of Chemistry, University of Illinois at Urbana-Champaign, 600 South Mathews Avenue, Urbana, Illinois 61801, USA.

出版信息

J Am Chem Soc. 2005 Sep 14;127(36):12544-54. doi: 10.1021/ja051528c.

DOI:10.1021/ja051528c
PMID:16144402
Abstract

We report the first solid-state NMR, crystallographic, and quantum chemical investigation of the origins of the 13C NMR chemical shifts of the imidazole group in histidine-containing dipeptides. The chemical shift ranges for Cgamma and Cdelta2 seen in eight crystalline dipeptides were very large (12.7-13.8 ppm); the shifts were highly correlated (R2= 0.90) and were dominated by ring tautomer effects and intermolecular interactions. A similar correlation was found in proteins, but only for buried residues. The imidazole 13C NMR chemical shifts were predicted with an overall rms error of 1.6-1.9 ppm over a 26 ppm range, by using quantum chemical methods. Incorporation of hydrogen bond partner molecules was found to be essential in order to reproduce the chemical shifts seen experimentally. Using AIM (atoms in molecules) theory we found that essentially all interactions were of a closed shell nature and the hydrogen bond critical point properties were highly correlated with the N...H...O (average R2= 0.93) and Nepsilon2...H...N (average R2= 0.98) hydrogen bond lengths. For Cepsilon1, the 13C chemical shifts were also highly correlated with each of these properties (at the Nepsilon2 site), indicating the dominance of intermolecular interactions for Cepsilon1. These results open up the way to analyzing 13C NMR chemical shifts, tautomer states (from Cdelta2, Cepsilon1 shifts), and hydrogen bond properties (from Cepsilon1 shifts) of histidine residue in proteins and should be applicable to imidazole-containing drug molecules bound to proteins, as well.

摘要

我们报告了对含组氨酸二肽中咪唑基团的(^{13}C)核磁共振化学位移起源的首次固态核磁共振、晶体学和量子化学研究。在八种结晶二肽中观察到的(Cγ)和(Cδ2)的化学位移范围非常大((12.7 - 13.8 ppm));这些位移高度相关((R^2 = 0.90)),并且主要受环互变异构效应和分子间相互作用的影响。在蛋白质中也发现了类似的相关性,但仅适用于埋藏残基。通过使用量子化学方法,在(26 ppm)范围内预测的咪唑(^{13}C)核磁共振化学位移的总体均方根误差为(1.6 - 1.9 ppm)。发现纳入氢键伙伴分子对于重现实验观察到的化学位移至关重要。使用分子中的原子(AIM)理论,我们发现基本上所有相互作用都是闭壳层性质的,并且氢键临界点性质与(N...H...O)(平均(R^2 = 0.93))和(Nε2...H...N)(平均(R^2 = 0.98))氢键长度高度相关。对于(Cε1),(^{13}C)化学位移也与这些性质中的每一个(在(Nε2)位点)高度相关,表明分子间相互作用对(Cε1)起主导作用。这些结果为分析蛋白质中组氨酸残基的(^{13}C)核磁共振化学位移、互变异构状态(来自(Cδ2)、(Cε1)位移)和氢键性质(来自(Cε1)位移)开辟了道路,并且也应该适用于与蛋白质结合的含咪唑药物分子。

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