Chow Michelle K M, Amin Abdullah A, Fulton Kate F, Whisstock James C, Buckle Ashley M, Bottomley Stephen P
Department of Biochemistry and Molecular Biology, P.O. Box 13D, Monash University, Vic. 3800, Australia.
Protein Expr Purif. 2006 Mar;46(1):166-71. doi: 10.1016/j.pep.2005.07.022. Epub 2005 Aug 15.
The expression and harvesting of proteins from insoluble inclusion bodies by solubilization and refolding is a technique commonly used in the production of recombinant proteins. To bring clarity to the large and widespread quantity of published protein refolding data, we have recently established the REFOLD database (http://refold.med.monash.edu.au), which is a freely available, open repository for protocols describing the refolding and purification of recombinant proteins. Refolding methods are currently published in many different formats and resources--REFOLD provides a standardized system for the structured reporting and presentation of these data. Furthermore, data in REFOLD are readily accessible using a simple search function, and the database also enables analyses which identify and highlight particular trends between suitable refolding and purification conditions and specific protein properties. This information may in turn serve to facilitate the rational design and development of new refolding protocols for novel proteins. There are approximately 200 proteins currently listed in REFOLD, and it is anticipated that with the continued contribution of data by researchers this number will grow significantly, thus strengthening the emerging trends and patterns and making this database a valuable tool for the scientific community.
通过溶解和重折叠从不溶性包涵体中表达和收获蛋白质是重组蛋白生产中常用的技术。为了使大量广泛发表的蛋白质重折叠数据更加清晰,我们最近建立了REFOLD数据库(http://refold.med.monash.edu.au),这是一个免费的开放资源库,用于存储描述重组蛋白重折叠和纯化的实验方案。目前,重折叠方法以多种不同格式发表在许多不同资源中——REFOLD为这些数据的结构化报告和展示提供了一个标准化系统。此外,使用简单的搜索功能可以轻松访问REFOLD中的数据,该数据库还支持进行分析,以识别和突出合适的重折叠和纯化条件与特定蛋白质特性之间的特定趋势。这些信息反过来可能有助于合理设计和开发针对新型蛋白质的新重折叠方案。目前REFOLD中大约列出了200种蛋白质,预计随着研究人员不断贡献数据,这个数字将大幅增长,从而强化新出现的趋势和模式,使该数据库成为科学界的一个有价值的工具。