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谷氨酸、信息素(V2R)、味觉(1)及其他相关G蛋白偶联受体的基因库与共同进化史。

The gene repertoire and the common evolutionary history of glutamate, pheromone (V2R), taste(1) and other related G protein-coupled receptors.

作者信息

Bjarnadóttir Thóra K, Fredriksson Robert, Schiöth Helgi B

机构信息

Department of Neuroscience, Uppsala University, BMC, Box 593, 751 24, Uppsala, Sweden.

出版信息

Gene. 2005 Dec 5;362:70-84. doi: 10.1016/j.gene.2005.07.029. Epub 2005 Oct 17.

DOI:10.1016/j.gene.2005.07.029
PMID:16229975
Abstract

Glutamate receptors (also known as clan C) are one of the main groups of GPCRs with many subgroup linked through complex evolutionary relationships. We performed thorough searches for genes coding for proteins belonging to this family in the human, mouse, Fugu, and zebrafish genomes, as well as in four invertebrate species. We assembled over 70 new full-length sequences from protein predictions excluding pseudogenes. This resulted in a total of 22 full-length sequences from the human genome, 79 from the mouse genome, 30 from the Fugu genome, and 32 from the zebrafish genome (pseudogenes are not included in these numbers). We show that the vertebrate Glutamate GPCRs form four main phylogenetic groups with a total of eight subgroups (Group I: V2R, TAS1R, GPRC6A, and CASR, Group II: GRM, Group III: GABA together with previously unpublished GPR158 and GPR158L and Group IV: GPRC5). All eight receptor subgroups are present both in mammals and fish, except for GPRC5 and GPR158. The pheromone (V2R), GPRC6, and sweet taste (TAS1) receptors were not found in invertebrates while GRM, GABA, and CASR were found in both C. elegans and C. intestinalis. The pheromone receptors are found in high numbers in mouse, zebrafish and Fugu but are only found as pseudogenes in the human genome. This report provides a comprehensive overview of the expansion/deletions of the groups within the Glutamate receptor family.

摘要

谷氨酸受体(也称为C类)是GPCRs的主要类别之一,通过复杂的进化关系连接着许多亚组。我们在人类、小鼠、河豚和斑马鱼基因组以及四种无脊椎动物物种中,对编码该家族蛋白质的基因进行了全面搜索。我们从蛋白质预测中组装了70多个新的全长序列,不包括假基因。这使得人类基因组中有22个全长序列,小鼠基因组中有79个,河豚基因组中有30个,斑马鱼基因组中有32个(这些数字不包括假基因)。我们发现脊椎动物的谷氨酸GPCRs形成了四个主要的系统发育组,共有八个亚组(第一组:V2R、TAS1R、GPRC6A和CASR,第二组:GRM,第三组:GABA以及之前未发表的GPR158和GPR158L,第四组:GPRC5)。除了GPRC5和GPR158外,所有八个受体亚组在哺乳动物和鱼类中都存在。信息素(V2R)、GPRC6和甜味(TAS1)受体在无脊椎动物中未被发现,而GRM、GABA和CASR在秀丽隐杆线虫和肠隐杆线虫中都有发现。信息素受体在小鼠、斑马鱼和河豚中大量存在,但在人类基因组中仅作为假基因存在。本报告全面概述了谷氨酸受体家族内各亚组的扩增/缺失情况。

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