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Dependence of the E. coli promoter strength and physical parameters upon the nucleotide sequence.
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E. coli promoter prediction using feed-forward neural networks.
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The sequence upstream of the -10 consensus sequence modulates the strength and induction time of stationary-phase promoters in Escherichia coli.
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Which nucleotides in the "-10" region are crucial to obtain a fully active MalT-dependent promoter?
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Molecular characterization of Borrelia burgdorferi erp promoter/operator elements.
J Bacteriol. 2004 May;186(9):2745-56. doi: 10.1128/JB.186.9.2745-2756.2004.
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The KEGG resource for deciphering the genome.
Nucleic Acids Res. 2004 Jan 1;32(Database issue):D277-80. doi: 10.1093/nar/gkh063.
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Structural basis of transcription initiation: an RNA polymerase holoenzyme-DNA complex.
Science. 2002 May 17;296(5571):1285-90. doi: 10.1126/science.1069595.
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Structure of the bacterial RNA polymerase promoter specificity sigma subunit.
Mol Cell. 2002 Mar;9(3):527-39. doi: 10.1016/s1097-2765(02)00470-7.
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Functional genomics of Escherichia coli in Japan.
Res Microbiol. 2000 Mar;151(2):121-8. doi: 10.1016/s0923-2508(00)00119-4.
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Promoter opening via a DNA fork junction binding activity.
Proc Natl Acad Sci U S A. 1998 Sep 29;95(20):11655-60. doi: 10.1073/pnas.95.20.11655.

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