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钯催化下蛋白质中区域选择性碳-碳键的形成;有机金属化学带来的新蛋白质化学。

Regioselective carbon-carbon bond formation in proteins with palladium catalysis; new protein chemistry by organometallic chemistry.

作者信息

Kodama Koichiro, Fukuzawa Seketsu, Nakayama Hiroshi, Kigawa Takanori, Sakamoto Kensaku, Yabuki Takashi, Matsuda Natsuko, Shirouzu Mikako, Takio Koji, Tachibana Kazuo, Yokoyama Shigeyuki

机构信息

Department of Biophysics and Biochemistry, School of Science, The University of Tokyo, Bunkyo, Tokyo 113-0033, Japan.

出版信息

Chembiochem. 2006 Jan;7(1):134-9. doi: 10.1002/cbic.200500290.

Abstract

Palladium-catalyzed reactions have contributed to the advancement of many areas of organic chemistry, in particular, the synthesis of organic compounds such as natural products and polymeric materials. In this study, we have used a Mizoroki-Heck reaction for site-specific carbon-carbon bond formation in the Ras protein. This was performed by the following two steps: 1) the His6-fused Ras protein containing 4-iodo-L-phenylalanine at position 32 (iF32-Ras-His) was prepared by genetic engineering and 2) the aryl iodide group on the iF32-Ras-His was coupled with vinylated biotin in the presence of a palladium catalyst. The biotinylation was confirmed by Western blotting and liquid chromatography-mass spectrometry (LC-MS). The regioselectivity of the Mizoroki-Heck reaction was furthermore confirmed by LC-MS/MS analysis. However, in addition to the biotinylated product (bF32-Ras-His), a dehalogenated product (F32-Ras-His) was detected by LC-MS/MS. This dehalogenation resulted from the undesired termination of the Mizoroki-Heck reaction due to steric and electrostatic hindrance around residue 32. The biotinylated Ras showed binding activity for the Ras-binding domain as its downstream target, Raf-1, with no sign of decomposition. This study is the first report of an application of organometallic chemistry in protein chemistry.

摘要

钯催化反应推动了有机化学诸多领域的发展,尤其是在天然产物和聚合物材料等有机化合物的合成方面。在本研究中,我们利用米佐罗基-赫克反应在Ras蛋白中实现位点特异性碳-碳键的形成。这通过以下两个步骤完成:1)通过基因工程制备在第32位含有4-碘-L-苯丙氨酸的His6融合Ras蛋白(iF32-Ras-His);2)在钯催化剂存在下,将iF32-Ras-His上的芳基碘基团与乙烯基化生物素偶联。通过蛋白质免疫印迹法和液相色谱-质谱联用(LC-MS)确认了生物素化。通过LC-MS/MS分析进一步证实了米佐罗基-赫克反应的区域选择性。然而,除了生物素化产物(bF32-Ras-His)外,LC-MS/MS还检测到了一种脱卤产物(F32-Ras-His)。这种脱卤是由于第32位残基周围的空间位阻和静电位阻导致米佐罗基-赫克反应意外终止所致。生物素化的Ras对其下游靶点Raf-1的Ras结合结构域显示出结合活性,且没有分解迹象。本研究是有机金属化学在蛋白质化学中应用的首次报道。

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