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叶际细菌的采样、回收和计数方法的评估。

Evaluation of methods for sampling, recovery, and enumeration of bacteria applied to the phylloplane.

机构信息

NSI Technology Services Corporation and Environmental Research Laboratory, U.S. Environmental Protection Agency, Corvallis, Oregon 97333.

出版信息

Appl Environ Microbiol. 1991 Jan;57(1):51-6. doi: 10.1128/aem.57.1.51-56.1991.

DOI:10.1128/aem.57.1.51-56.1991
PMID:16348404
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC182663/
Abstract

Determining the fate and survival of genetically engineered microorganisms released into the environment requires the development and application of accurate and practical methods of detection and enumeration. Several experiments were performed to examine quantitative recovery methods that are commonly used or that have potential applications. In these experiments, Erwinia herbicola and Enterobacter cloacae were applied in greenhouses to Blue Lake bush beans (Phaseolus vulgaris) and Cayuse oats (Avena sativa). Sampling indicated that the variance in bacterial counts among leaves increased over time and that this increase caused an overestimation of the mean population size by bulk leaf samples relative to single leaf samples. An increase in the number of leaves in a bulk sample, above a minimum number, did not significantly reduce the variance between samples. Experiments evaluating recovery methods demonstrated that recovery of bacteria from leaves was significantly better with stomacher blending, than with blending, sonication, or washing and that the recovery efficiency was constant over a range of sample inoculum densities. Delayed processing of leaf samples, by storage in a freezer, did not significantly lower survival and recovery of microorganisms when storage was short term and leaves were not stored in buffer. The drop plate technique for enumeration of bacteria did not significantly differ from the spread plate method. Results of these sampling, recovery, and enumeration experiments indicate a need for increased development and standardization of methods used by researchers as there are significant differences among, and also important limitations to, some of the methods used.

摘要

确定释放到环境中的基因工程微生物的命运和存活需要开发和应用准确实用的检测和计数方法。进行了几项实验来检查常用或具有潜在应用的定量回收方法。在这些实验中,将草生欧文氏菌和阴沟肠杆菌应用于温室中的蓝湖菜豆(菜豆)和凯尤塞燕麦(燕麦)。采样表明,叶片中细菌计数的方差随时间增加,并且这种增加导致相对于单个叶片样本,批量叶片样本对平均种群大小的估计过高。批量样本中叶片数量的增加(超过最小数量)不会显著降低样品之间的方差。评估回收方法的实验表明,与混合、超声或洗涤相比,用 stomacher 混合从叶片中回收细菌的效果明显更好,并且在样品接种密度范围内回收效率是恒定的。将叶片样品储存在冰箱中以延迟处理,在短期储存和叶片未储存在缓冲液中时,不会显著降低微生物的存活和回收。用于细菌计数的滴板技术与平板法没有显著差异。这些采样、回收和计数实验的结果表明,需要增加研究人员使用的方法的开发和标准化,因为其中一些方法之间存在显著差异,并且一些方法也存在重要限制。

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本文引用的文献

1
Diel Variation in Population Size and Ice Nucleation Activity of Pseudomonas syringae on Snap Bean Leaflets.丁香假单胞菌在豇豆小叶上的种群大小和冰核活性的日变化。
Appl Environ Microbiol. 1989 Mar;55(3):623-30. doi: 10.1128/aem.55.3.623-630.1989.
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Aerial Dispersal and Epiphytic Survival of Pseudomonas syringae during a Pretest for the Release of Genetically Engineered Strains into the Environment.在将遗传工程菌株释放到环境中的预试验期间,丁香假单胞菌的空气散布和附生生存。
Appl Environ Microbiol. 1988 Jun;54(6):1557-63. doi: 10.1128/aem.54.6.1557-1563.1988.
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Toxicity of smoke to epiphytic ice nucleation-active bacteria.烟雾对附生冰核活性细菌的毒性。
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Comparison of the Pour, Spread, and Drop Plate Methods for Enumeration of Rhizobium spp. in Inoculants Made from Presterilized Peat.比较预灭菌泥炭制成的接种剂中根瘤菌属(Rhizobium spp.)的倾注法、划线法和滴液法的计数。
Appl Environ Microbiol. 1982 Nov;44(5):1246-7. doi: 10.1128/aem.44.5.1246-1247.1982.
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Plants as sources of airborne bacteria, including ice nucleation-active bacteria.植物作为空气传播细菌的来源,包括冰核活性细菌。
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Predictive model of conjugative plasmid transfer in the rhizosphere and phyllosphere.根际和叶际中接合性质粒转移的预测模型。
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Microcolony epifluorescence microscopy for selective enumeration of injured bacteria in frozen and heat-treated foods.用于选择性计数冷冻和热处理食品中受损细菌的微菌落落射荧光显微镜技术。
Appl Environ Microbiol. 1989 Apr;55(4):778-87. doi: 10.1128/aem.55.4.778-787.1989.
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Distribution of ice nucleation-active bacteria on plants in nature.自然界中植物上冰核活性细菌的分布
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