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一种用于表征哺乳动物胶原蛋白上多个水相区的核磁共振方法。

An NMR method to characterize multiple water compartments on mammalian collagen.

作者信息

Fullerton Gary D, Nes Elena, Amurao Maxwell, Rahal Andres, Krasnosselskaia Lada, Cameron Ivan

机构信息

Radiology Department, University of Texas HSCSA, Floyd Curl Drive, San Antonio, TX 78229-3900, United States.

出版信息

Cell Biol Int. 2006 Jan;30(1):66-73. doi: 10.1016/j.cellbi.2005.09.009. Epub 2005 Dec 22.

DOI:10.1016/j.cellbi.2005.09.009
PMID:16376582
Abstract

A molecular model is proposed to explain water 1H NMR spin-lattice relaxation at different levels of hydration (NMR titration method) on collagen. A fast proton exchange model is used to identify and characterize protein hydration compartments at three distinct Gibbs free energy levels. The NMR titration method reveals a spectrum of water motions with three well-separated peaks in addition to bulk water that can be uniquely characterized by sequential dehydration. Categorical changes in water motion occur at critical hydration levels h (g water/g collagen) defined by integral multiples N = 1, 4 and 24 times the fundamental hydration value of one water bridge per every three amino acid residues as originally proposed by Ramachandran in 1968. Changes occur at (1) the Ramachandran single water bridge between a positive amide and negative carbonyl group at h1 = 0.0658 g/g, (2) the Berendsen single water chain per cleft at h2 = 0.264 g/g, and (3) full monolayer coverage with six water chains per cleft level at h3 = 1.584 g/g. The NMR titration method is verified by comparison of measured NMR relaxation compartments with molecular hydration compartments predicted from models of collagen structure. NMR titration studies of globular proteins using the hydration model may provide unique insight into the critical contributions of hydration to protein folding.

摘要

提出了一个分子模型,以解释胶原在不同水合水平下的水1H NMR自旋晶格弛豫(NMR滴定法)。使用快速质子交换模型来识别和表征处于三个不同吉布斯自由能水平的蛋白质水合区室。NMR滴定法揭示了除大量水之外具有三个明显分离峰的一系列水运动,这些峰可通过连续脱水进行独特表征。水运动的分类变化发生在由关键水合水平h(克水/克胶原)决定的情况下,h由1968年Ramachandran最初提出的每三个氨基酸残基一个水桥的基本水合值的整数倍N = 1、4和24倍定义。变化发生在:(1)在h1 = 0.0658克/克时,正酰胺和负羰基之间的Ramachandran单水桥;(2)在h2 = 0.264克/克时,每个裂隙处的Berendsen单水链;(3)在h3 = 1.584克/克时,每个裂隙水平有六个水链的完全单层覆盖。通过将测量的NMR弛豫区室与从胶原结构模型预测的分子水合区室进行比较,验证了NMR滴定法。使用水合模型对球状蛋白质进行NMR滴定研究,可能会为水合作用对蛋白质折叠的关键贡献提供独特的见解。

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