Smagghe Benoit J, Sarath Gautam, Ross Emily, Hilbert Jean-Louis, Hargrove Mark S
Department of Biochemistry, Biophysics, and Molecular Biology, Iowa State University, Ames, Iowa 50011, USA.
Biochemistry. 2006 Jan 17;45(2):561-70. doi: 10.1021/bi051902l.
Hexacoordinate hemoglobins are found in many living organisms ranging from prokaryotes to plants and animals. They are named "hexacoordinate" because of reversible coordination of the heme iron by a histidine side chain located in the heme pocket. This endogenous coordination competes with exogenous ligand binding and causes multiphasic relaxation time courses following rapid mixing or flash photolysis experiments. Previous rapid mixing studies have assumed a steady-state relationship between hexacoordination and exogenous ligand binding that does not correlate with observed time courses for binding. Here, we demonstrate that this assumption is not valid for some hexacoordinate hemoglobins, and that multiphasic time courses are due to an appreciable fraction of pentacoordinate heme resulting from relatively small equilibrium constants for hexacoordination (K(H)). CO binding reactions initiated by rapid mixing are measured for four plant hexacoordinate hemoglobins, human neuroglobin and cytoglobin, and Synechocystis hemoglobin. The plant proteins, while showing a surprising degree of variability, differ from the others in having much lower values of K(H). Neuroglobin and cytoglobin display dramatic biphasic time courses for CO binding that have not been observed using other techniques. Finally, an independent spectroscopic quantification of K(H) is presented that complements rapid mixing for the investigation of hexacoordination. These results demonstrate that hexacoordination could play a much larger role in regulating affinity constants for ligand binding in human neuroglobin and cytoglobin than in the plant hexacoordinate hemoglobins.
六配位血红蛋白存在于从原核生物到植物和动物的许多生物体中。它们被称为“六配位”,是因为位于血红素口袋中的组氨酸侧链与血红素铁发生可逆配位。这种内源性配位与外源性配体结合相互竞争,并在快速混合或闪光光解实验后导致多相弛豫时间进程。先前的快速混合研究假设六配位与外源性配体结合之间存在稳态关系,但这与观察到的结合时间进程不相关。在这里,我们证明了这一假设对某些六配位血红蛋白无效,并且多相时间进程是由于六配位(K(H))的平衡常数相对较小导致相当一部分五配位血红素的存在。通过快速混合引发的CO结合反应,我们测量了四种植物六配位血红蛋白、人类神经球蛋白和细胞球蛋白以及集胞藻血红蛋白。这些植物蛋白虽然表现出惊人的变异性,但与其他蛋白不同的是,它们的K(H)值要低得多。神经球蛋白和细胞球蛋白在CO结合方面表现出显著的双相时间进程,这是使用其他技术未观察到的。最后,我们提出了一种独立的K(H)光谱定量方法,它补充了快速混合用于六配位研究的不足。这些结果表明,六配位在调节人类神经球蛋白和细胞球蛋白中配体结合的亲和常数方面可能比在植物六配位血红蛋白中发挥更大的作用。