Halder Puspita, Trent James T, Hargrove Mark S
Department of Biochemistry, Biophysics, and Molecular Biology, Iowa State University, Ames, Iowa 50011, USA.
Proteins. 2007 Jan 1;66(1):172-82. doi: 10.1002/prot.21210.
Present in most organisms, hexacoordinate hemoglobins (hxHbs) are proteins that have evolved the capacity for reversible bis-histidyl heme coordination. The heme prosthetic group enables diverse protein functionality, such as electron transfer, redox reactions, ligand transport, and enzymatic catalysis. The reactivity of heme is greatly effected by the coordination and noncovalent chemical environment imposed by its connate protein. Of considerable interest is how the hxHb globin fold achieves reversible intramolecular coordination while still enabling high-affinity binding of oxygen, nitric oxide, and other small ligands. Here we explore this question by examining the role of the protein matrix on coordination behavior in a group of hxHbs from animals, plants, and bacteria, including human neuroglobin and cytoglobin, a nonsymbiotic hemoglobin from rice, and a truncated hemoglobin from the cyanobacterium Synechocystis. This is done with a set of experiments measuring the reduction potentials of each wild-type hxHb and its corresponding mutant protein where the reversibly bound histidine (the distal His) has been replaced with a noncoordinating side chain. These reduction potentials, coupled with studies of the mutant proteins saturated with exogenous imidazole, enable us to assess the effects of the protein matrices on histidine coordination. Our results show significant variation among the hxHbs, demonstrating flexibility in the globin moiety's ability to regulate reversible coordination. This regulation is particularly evident in the plant nonsymbiotic hemoglobins, where ferric state histidine coordination affinity is substantially lowered by the protein matrix.
六配位血红蛋白(hxHbs)存在于大多数生物体中,是一类进化出可逆双组氨酸血红素配位能力的蛋白质。血红素辅基赋予了蛋白质多种功能,如电子转移、氧化还原反应、配体运输和酶催化作用。血红素的反应活性受其天然蛋白质所施加的配位和非共价化学环境的极大影响。一个相当有趣的问题是,hxHb球蛋白折叠结构如何在实现可逆分子内配位的同时,仍能实现对氧气、一氧化氮和其他小配体的高亲和力结合。在这里,我们通过研究蛋白质基质在一组来自动物、植物和细菌的hxHbs(包括人类神经球蛋白和细胞球蛋白、水稻的一种非共生血红蛋白以及蓝藻集胞藻的一种截短血红蛋白)的配位行为中的作用,来探讨这个问题。这是通过一组实验来完成的,这些实验测量了每种野生型hxHb及其相应突变蛋白的还原电位,其中可逆结合的组氨酸(远端组氨酸)已被非配位侧链取代。这些还原电位,再结合对外源咪唑饱和的突变蛋白的研究,使我们能够评估蛋白质基质对组氨酸配位的影响。我们的结果显示,hxHbs之间存在显著差异,表明球蛋白部分在调节可逆配位能力方面具有灵活性。这种调节在植物非共生血红蛋白中尤为明显,其中蛋白质基质使铁状态组氨酸的配位亲和力大幅降低。