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深入了解氧代酯和硫代酯的结构性质及构象偏好:碳酸单硫代甲酯(CH3OC(O)SCH3)的气相和晶体结构以及构象分析

Toward an intimate understanding of the structural properties and conformational preference of oxoesters and thioesters: gas and crystal structure and conformational analysis of dimethyl monothiocarbonate, CH3OC(O)SCH3.

作者信息

Erben Mauricio F, Boese Roland, Della Védova Carlos O, Oberhammer Heinz, Willner Helge

机构信息

CEQUINOR (CONICET), Departamento de Química, Facultad de Ciencias Exactas, Universidad Nacional de La Plata, 115 C.C. 962, (B1900AJL) La Plata, Buenos Aires, Argentina.

出版信息

J Org Chem. 2006 Jan 20;71(2):616-22. doi: 10.1021/jo052026k.

DOI:10.1021/jo052026k
PMID:16408971
Abstract

[structure: see text] The molecular structure and conformational properties of dimethyl monothiocarbonate, CH3OC(O)SCH3, have been studied in the gas phase by gas electron diffraction (GED) and vibrational spectroscopy and in the solid state by X-ray crystallography. The experimental investigations were supplemented by quantum chemical calculations at the B3LYP/6-311++G(3df,2p) and MP2/6-311++G(2df,p) levels of approximation. The gaseous molecule exhibits only one conformation having Cs symmetry with synperiplanar orientation of both the C-S and the C-O single bonds relative to the C=O double bond. The following skeletal geometric parameters were derived from the GED analysis (r(hl) values with 3sigma uncertainties): C=O = 1.203(4) A, C(sp(2))-O = 1.335(5) A, C(sp(3))-O = 1.437(5) A, C(sp(2))-S = 1.763(5) A, and C(sp(3))-S = 1.803(5) A; O=C-O = 125.9(8) degrees , O=C-S = 125.7(7) degrees , O-C-S = 108.4(9) degrees , and C-O-C = 113.4(15) degrees . The structure of a single crystal, grown by a miniature zone-melting procedure, was determined by X-ray diffraction analysis at a low temperature. The crystalline solid [monoclinic, P2(1)/n, a = 12.6409(9) A, b = 4.1678(3) A, and c = 19.940(1) A, beta = 98.164(1) degrees ] exists exclusively as molecules in the synperiplanar conformation and with geometrical parameters that agree with those of the molecule in the gas phase. The results are discussed in terms of anomeric and mesomeric effects and in terms of a natural bond orbital analysis.

摘要

[结构:见正文] 通过气相电子衍射(GED)和振动光谱在气相中以及通过X射线晶体学在固态中研究了二甲基单硫代碳酸酯CH₃OC(O)SCH₃的分子结构和构象性质。实验研究辅以在B3LYP/6 - 311++G(3df,2p)和MP2/6 - 311++G(2df,p)近似水平下的量子化学计算。气态分子仅呈现一种具有Cs对称性的构象,其中C - S和C - O单键相对于C = O双键均为同面共平面取向。从GED分析得出以下骨架几何参数(具有3σ不确定度的r(hl)值):C = O = 1.203(4) Å,C(sp(2)) - O = 1.335(5) Å,C(sp(3)) - O = 1.437(5) Å,C(sp(2)) - S = 1.763(5) Å,以及C(sp(3)) - S = 1.803(5) Å;O = C - O = 125.9(8)°,O = C - S = 125.7(7)°,O - C - S = 108.4(9)°,以及C - O - C = 113.4(15)°。通过微型区域熔融法生长的单晶结构在低温下通过X射线衍射分析确定。结晶固体[单斜晶系,P2(1)/n,a = 12.6409(9) Å,b = 4.1678(3) Å,以及c = 19.940(1) Å,β = 98.164(1)°]仅以同面共平面构象的分子形式存在,其几何参数与气相中的分子参数一致。根据端基异构效应和中介效应以及自然键轨道分析对结果进行了讨论。

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