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来自天蓝色链霉菌质粒pIJ101的korB基因产物在大肠杆菌中的表达、特性分析及其在korB和kilB启动子上结合位点的确定

Expression and characterisation of the korB gene product from the Streptomyces lividans plasmid pIJ101 in Escherichia coli and determination of its binding site on the korB and kilB promoters.

作者信息

Zaman S, Richards H, Ward J

机构信息

Department of Biology, University College, London, UK.

出版信息

Nucleic Acids Res. 1992 Jul 25;20(14):3693-700. doi: 10.1093/nar/20.14.3693.

DOI:10.1093/nar/20.14.3693
PMID:1641335
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC334020/
Abstract

A 0.5kb Spel-BclI fragment containing the pIJ101 korB ORF was cloned into pUC8 under the control of the lacZ promoter, creating pQR206. In vitro coupled transcription-translation of pQR206 identified a protein product of approximately 10kDa, which corresponds to the predicted molecular weight deduced from the korB sequence. pQR206 was used to express the 10kDa KorB protein in vivo in E. coli. Crude E. coli protein extracts containing KorB were shown to bind to a 0.8kb kilB fragment and a 0.5kb korB fragment in gel retardation assays. DNasel footprinting indicated that the DNA recognition sequence of the KorB protein lies within a 60bp protected region encompassing the kilB promoter and a 36bp region encompassing the korB promoter.

摘要

将包含pIJ101 korB开放阅读框的0.5kb Spel - BclI片段在lacZ启动子的控制下克隆到pUC8中,构建成pQR206。对pQR206进行体外偶联转录 - 翻译,鉴定出一种约10kDa的蛋白质产物,这与从korB序列推导的预测分子量相符。pQR206用于在大肠杆菌体内表达10kDa的KorB蛋白。在凝胶阻滞试验中,含有KorB的大肠杆菌粗蛋白提取物显示能与一个0.8kb的kilB片段和一个0.5kb的korB片段结合。DNasel足迹分析表明,KorB蛋白的DNA识别序列位于一个包含kilB启动子的60bp保护区域内以及一个包含korB启动子的36bp区域内。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/847c/334020/dd64bfc6c218/nar00225-0150-a.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/847c/334020/ba91109508d1/nar00225-0148-a.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/847c/334020/a5a64bafa7c8/nar00225-0148-b.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/847c/334020/ac5f26046d95/nar00225-0149-a.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/847c/334020/7ab463aedd4f/nar00225-0149-b.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/847c/334020/dd64bfc6c218/nar00225-0150-a.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/847c/334020/ba91109508d1/nar00225-0148-a.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/847c/334020/a5a64bafa7c8/nar00225-0148-b.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/847c/334020/ac5f26046d95/nar00225-0149-a.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/847c/334020/7ab463aedd4f/nar00225-0149-b.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/847c/334020/dd64bfc6c218/nar00225-0150-a.jpg

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Expression and characterisation of the korB gene product from the Streptomyces lividans plasmid pIJ101 in Escherichia coli and determination of its binding site on the korB and kilB promoters.来自天蓝色链霉菌质粒pIJ101的korB基因产物在大肠杆菌中的表达、特性分析及其在korB和kilB启动子上结合位点的确定
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引用本文的文献

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2
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3
Minimal and contributing sequence determinants of the cis-acting locus of transfer (clt) of streptomycete plasmid pIJ101 occur within an intrinsically curved plasmid region.

本文引用的文献

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Characterization of translational initiation sites in E. coli.大肠杆菌中转录起始位点的表征
Nucleic Acids Res. 1982 May 11;10(9):2971-96. doi: 10.1093/nar/10.9.2971.
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Instability of a high-copy-number mutant of a miniplasmid derived from broad host range IncP plasmid RK2.源自广宿主范围IncP质粒RK2的微型质粒高拷贝数突变体的不稳定性。
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链霉菌质粒pIJ101的顺式作用转移位点(clt)的最小和辅助序列决定因素存在于一个固有弯曲的质粒区域内。
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KorSA from the Streptomyces integrative element pSAM2 is a central transcriptional repressor: target genes and binding sites.来自链霉菌整合元件pSAM2的KorSA是一种核心转录阻遏物:靶基因和结合位点。
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Transfer functions of the conjugative integrating element pSAM2 from Streptomyces ambofaciens: characterization of a kil-kor system associated with transfer.来自产二素链霉菌的接合整合元件pSAM2的转移功能:与转移相关的一个致死-抑制系统的特性
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The active form of the KorB protein encoded by the Streptomyces plasmid pIJ101 is a processed product that binds differentially to the two promoters it regulates.由链霉菌质粒pIJ101编码的KorB蛋白的活性形式是一种加工产物,它与它所调控的两个启动子有不同的结合。
J Bacteriol. 1993 Nov;175(21):6996-7005. doi: 10.1128/jb.175.21.6996-7005.1993.
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The pUC plasmids, an M13mp7-derived system for insertion mutagenesis and sequencing with synthetic universal primers.pUC质粒,一种源自M13mp7的用于插入诱变和使用合成通用引物进行测序的系统。
Gene. 1982 Oct;19(3):259-68. doi: 10.1016/0378-1119(82)90015-4.
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Gene expression in Streptomyces: construction and application of promoter-probe plasmid vectors in Streptomyces lividans.链霉菌中的基因表达:在淡紫灰链霉菌中启动子探针质粒载体的构建与应用
Mol Gen Genet. 1982;187(2):265-77. doi: 10.1007/BF00331128.
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Mol Gen Genet. 1982;185(2):223-8. doi: 10.1007/BF00330791.
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Equilibria and kinetics of lac repressor-operator interactions by polyacrylamide gel electrophoresis.通过聚丙烯酰胺凝胶电泳研究乳糖阻遏物-操纵基因相互作用的平衡与动力学
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Molecular weight analysis of oligopeptides by electrophoresis in polyacrylamide gel with sodium dodecyl sulfate.在含十二烷基硫酸钠的聚丙烯酰胺凝胶中通过电泳对寡肽进行分子量分析。
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RNA polymerase-DNA interactions in Streptomyces. In vitro studies of a S. lividans plasmid promoter with S. coelicolor RNA polymerase.链霉菌中的RNA聚合酶与DNA的相互作用。用天蓝色链霉菌RNA聚合酶对淡青链霉菌质粒启动子进行的体外研究。
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Regions of broad-host-range plasmid RK2 involved in replication and stable maintenance in nine species of gram-negative bacteria.广宿主范围质粒RK2中参与在9种革兰氏阴性菌中复制和稳定维持的区域。
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