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铁调素缺乏小鼠的基因表达谱分析:微阵列证据表明存在显著的表达变化但未检测到神经退行性变。

Gene expression profiling in frataxin deficient mice: microarray evidence for significant expression changes without detectable neurodegeneration.

作者信息

Coppola Giovanni, Choi Sang-Hyun, Santos Manuela M, Miranda Carlos J, Tentler Dmitri, Wexler Eric M, Pandolfo Massimo, Geschwind Daniel H

机构信息

Program in Neurogenetics, Department of Neurology, David Geffen School of Medicine-UCLA, 710 Westwood Plaza, Los Angeles, CA 90095, USA.

出版信息

Neurobiol Dis. 2006 May;22(2):302-11. doi: 10.1016/j.nbd.2005.11.014. Epub 2006 Jan 25.

DOI:10.1016/j.nbd.2005.11.014
PMID:16442805
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC2886035/
Abstract

Friedreich's ataxia (FRDA) is caused by reduction of frataxin levels to 5-35%. To better understand the biochemical sequelae of frataxin reduction, in absence of the confounding effects of neurodegeneration, we studied the gene expression profile of a mouse model expressing 25-36% of the normal frataxin levels, and not showing a detectable phenotype or neurodegenerative features. Despite having no overt phenotype, a clear microarray gene expression phenotype was observed. This phenotype followed the known regional susceptibility in this disease, most changes occurring in the spinal cord. Additionally, gene ontology analysis identified a clear mitochondrial component, consistent with previous findings. We were able to confirm a subset of changes in fibroblast cell lines from patients. The identification of a core set of genes changing early in the FRDA pathogenesis can be a useful tool in both clarifying the disease process and in evaluating new therapeutic strategies.

摘要

弗里德赖希共济失调(FRDA)是由铁调素水平降至5% - 35%所致。为了在不存在神经退行性变干扰效应的情况下,更好地理解铁调素减少的生化后果,我们研究了一种小鼠模型的基因表达谱,该模型表达的铁调素水平为正常水平的25% - 36%,且未表现出可检测到的表型或神经退行性特征。尽管没有明显的表型,但观察到了明显的微阵列基因表达表型。这种表型遵循了该疾病已知的区域易感性,大多数变化发生在脊髓中。此外,基因本体分析确定了明显的线粒体成分,这与先前的研究结果一致。我们能够证实患者成纤维细胞系中的一部分变化。确定在FRDA发病机制早期发生变化的一组核心基因,在阐明疾病过程和评估新的治疗策略方面都可能是一个有用的工具。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/e1c7/2886035/9a85d525a41a/nihms1062f3.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/e1c7/2886035/f2706da7ab20/nihms1062f1.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/e1c7/2886035/5941a283ebc1/nihms1062f2.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/e1c7/2886035/9a85d525a41a/nihms1062f3.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/e1c7/2886035/f2706da7ab20/nihms1062f1.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/e1c7/2886035/5941a283ebc1/nihms1062f2.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/e1c7/2886035/9a85d525a41a/nihms1062f3.jpg

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本文引用的文献

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Gene expression analysis using cDNA microarrays.使用cDNA微阵列进行基因表达分析。
Curr Protoc Neurosci. 2002 Nov;Chapter 4:Unit 4.28. doi: 10.1002/0471142301.ns0428s20.
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Frataxin deficiency alters heme pathway transcripts and decreases mitochondrial heme metabolites in mammalian cells.酵母氨酸缺乏会改变哺乳动物细胞中的血红素途径转录本,并降低线粒体血红素代谢产物。
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Extra-mitochondrial localisation of frataxin and its association with IscU1 during enterocyte-like differentiation of the human colon adenocarcinoma cell line Caco-2.人结肠腺癌细胞系Caco-2向肠上皮样细胞分化过程中,铁调素的线粒体外定位及其与IscU1的关联
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Friedreich ataxia: the oxidative stress paradox.弗里德赖希共济失调:氧化应激悖论
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Friedreich's ataxia, no changes in mitochondrial labile iron in human lymphoblasts and fibroblasts: a decrease in antioxidative capacity?弗里德赖希共济失调,人淋巴母细胞和成纤维细胞中线粒体不稳定铁无变化:抗氧化能力降低?
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Iron-sulfur protein maturation in human cells: evidence for a function of frataxin.人类细胞中的铁硫蛋白成熟:关于frataxin功能的证据
Hum Mol Genet. 2004 Dec 1;13(23):3007-15. doi: 10.1093/hmg/ddh324. Epub 2004 Oct 27.
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Gene profiling links SCA1 pathophysiology to glutamate signaling in Purkinje cells of transgenic mice.基因谱分析将脊髓小脑共济失调1型(SCA1)的病理生理学与转基因小鼠浦肯野细胞中的谷氨酸信号传导联系起来。
Hum Mol Genet. 2004 Oct 15;13(20):2535-43. doi: 10.1093/hmg/ddh268. Epub 2004 Aug 18.
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Oxidative stress in neurodegeneration: cause or consequence?神经退行性变中的氧化应激:原因还是结果?
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Real time PCR quantification of frataxin mRNA in the peripheral blood leucocytes of Friedreich ataxia patients and carriers.实时定量PCR检测弗里德赖希共济失调患者及携带者外周血白细胞中frataxin mRNA的含量。
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Friedreich ataxia mouse models with progressive cerebellar and sensory ataxia reveal autophagic neurodegeneration in dorsal root ganglia.患有进行性小脑和感觉性共济失调的弗里德赖希共济失调小鼠模型显示背根神经节存在自噬性神经变性。
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