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细胞穿透性核糖核酸酶大肠杆菌素E3与磷脂膜相互作用时的全局结构重排。

Global structural rearrangement of the cell penetrating ribonuclease colicin E3 on interaction with phospholipid membranes.

作者信息

Mosbahi Khédidja, Walker Daniel, James Richard, Moore Geoffrey R, Kleanthous Colin

机构信息

Department of Biology, University of York, York YO10 5YW, UK.

出版信息

Protein Sci. 2006 Mar;15(3):620-7. doi: 10.1110/ps.051890306. Epub 2006 Feb 1.

Abstract

Nuclease type colicins and related bacteriocins possess the unprecedented ability to translocate an enzymatic polypeptide chain across the Gram-negative cell envelope. Here we use the rRNase domain of the cytotoxic ribonuclease colicin E3 to examine the structural changes on its interaction with the membrane. Using phospholipid vesicles as model membranes we show that anionic membranes destabilize the nuclease domain of the rRNase type colicin E3. Intrinsic tryptophan fluorescence and circular dichroism show that vesicles consisting of pure DOPA act as a powerful protein denaturant toward the rRNase domain, although this interaction can be entirely prevented by the addition of salt. Binding of E3 rRNase to DOPA vesicles is an endothermic process (DeltaH=24 kcal mol-1), reflecting unfolding of the protein. Consistent with this, binding of a highly destabilized mutant of the E3 rRNase to DOPA vesicles is exothermic. With mixed vesicles containing anionic and neutral phospholipids at a ratio of 1:3, set to mimic the charge of the Escherichia coli inner membrane, destabilization of E3 rRNase is lessened, although the melting temperature of the protein at pH 7.0 is greatly reduced from 50 degrees C to 30 degrees C. The interaction of E3 rRNase with 1:3 DOPA:DOPC vesicles is also highly dependent on both ionic strength and temperature. We discuss these results in terms of the likely interaction of the E3 rRNase and the related E9 DNase domains with the E. coli inner membrane and their subsequent translocation to the cell cytoplasm.

摘要

核酸酶类大肠杆菌素及相关细菌素具有将酶促多肽链转运穿过革兰氏阴性菌细胞包膜的前所未有的能力。在此,我们利用细胞毒性核糖核酸酶大肠杆菌素E3的rRNase结构域来研究其与膜相互作用时的结构变化。使用磷脂囊泡作为模型膜,我们发现阴离子膜会使rRNase型大肠杆菌素E3的核酸酶结构域不稳定。内源色氨酸荧光和圆二色性表明,由纯DOPA组成的囊泡对rRNase结构域具有强大的蛋白质变性作用,不过添加盐可完全阻止这种相互作用。E3 rRNase与DOPA囊泡的结合是一个吸热过程(ΔH = 24 kcal mol-1),反映了蛋白质的去折叠。与此一致的是,E3 rRNase的高度不稳定突变体与DOPA囊泡的结合是放热的。对于含有比例为1:3的阴离子和中性磷脂的混合囊泡,设定为模拟大肠杆菌内膜的电荷,E3 rRNase的不稳定程度有所降低,尽管该蛋白质在pH 7.0时的解链温度从50℃大幅降至30℃。E3 rRNase与1:3 DOPA:DOPC囊泡的相互作用也高度依赖离子强度和温度。我们根据E3 rRNase和相关E9 DNase结构域与大肠杆菌内膜的可能相互作用及其随后向细胞质的转运来讨论这些结果。

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本文引用的文献

1
Identification of the catalytic motif of the microbial ribosome inactivating cytotoxin colicin E3.
Protein Sci. 2004 Jun;13(6):1603-11. doi: 10.1110/ps.04658504. Epub 2004 May 7.
3
Structural inhibition of the colicin D tRNase by the tRNA-mimicking immunity protein.
EMBO J. 2004 Apr 7;23(7):1474-82. doi: 10.1038/sj.emboj.7600162. Epub 2004 Mar 11.
6
Killing of E coli cells by E group nuclease colicins.
Biochimie. 2002 May-Jun;84(5-6):381-9. doi: 10.1016/s0300-9084(02)01450-5.
7
Colicin crystal structures: pathways and mechanisms for colicin insertion into membranes.
Biochim Biophys Acta. 2002 Oct 11;1565(2):333-46. doi: 10.1016/s0005-2736(02)00579-5.
8
The cytotoxic domain of colicin E9 is a channel-forming endonuclease.
Nat Struct Biol. 2002 Jun;9(6):476-84. doi: 10.1038/nsb797.
9
Protein unfolding by the mitochondrial membrane potential.
Nat Struct Biol. 2002 Apr;9(4):301-7. doi: 10.1038/nsb772.

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