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马疱疹病毒1型短独特区域4.7千碱基BamHI-EcoRI片段的序列分析。

Sequence analysis of the 4.7-kb BamHI-EcoRI fragment of the equine herpesvirus type-1 short unique region.

作者信息

Elton D M, Halliburton I W, Killington R A, Meredith D M, Bonass W A

机构信息

Department of Microbiology, University of Leeds, U.K.

出版信息

Gene. 1991 May 30;101(2):203-8. doi: 10.1016/0378-1119(91)90412-5.

DOI:10.1016/0378-1119(91)90412-5
PMID:1647359
Abstract

To localize gene that may encode immunogens potentially important for recombinant vaccine design, we have analysed a region of the equine herpesvirus type-1 (EHV-1) genome where a glycoprotein-encoding gene had previously been mapped. The 4707-bp BamHI-EcoRI fragment from the short unique region of the EHV-1 genome was sequenced. This sequence contains three entire open reading frames (ORFs), and portions of two more. ORF1 codes for 161 amino acids (aa), and represents the C terminus of a possible membrane-bound protein. ORF2 (424 aa) and ORF3 (550 aa) are potential glycoprotein-encoding genes; the predicted aa sequences contain possible signal sequences, N-linked glycosylation sites and transmembrane domains; they also show homology to the glycoproteins gI and gE of herpes simplex virus type-1 (HSV-1), and the related proteins of pseudorabies virus and varicella-zoster virus. The predicted aa sequence of ORF4 shares no homology with other known herpesvirus proteins, but the nucleotide sequence shows a high level of homology with the corresponding region of the EHV-4 genome. ORF5 may be related to US9 of HSV-1.

摘要

为了定位可能编码对重组疫苗设计具有潜在重要性的免疫原的基因,我们分析了1型马疱疹病毒(EHV-1)基因组的一个区域,之前已在该区域定位了一个糖蛋白编码基因。对来自EHV-1基因组短独特区域的4707 bp BamHI-EcoRI片段进行了测序。该序列包含三个完整的开放阅读框(ORF),以及另外两个的部分。ORF1编码161个氨基酸(aa),代表一种可能的膜结合蛋白的C末端。ORF2(424 aa)和ORF3(550 aa)是潜在的糖蛋白编码基因;预测的氨基酸序列包含可能的信号序列、N-连接糖基化位点和跨膜结构域;它们还与1型单纯疱疹病毒(HSV-1)的糖蛋白gI和gE以及伪狂犬病病毒和水痘-带状疱疹病毒的相关蛋白具有同源性。ORF4的预测氨基酸序列与其他已知的疱疹病毒蛋白没有同源性,但核苷酸序列与EHV-4基因组的相应区域具有高度同源性。ORF5可能与HSV-1的US9相关。

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Sequence analysis of the 4.7-kb BamHI-EcoRI fragment of the equine herpesvirus type-1 short unique region.马疱疹病毒1型短独特区域4.7千碱基BamHI-EcoRI片段的序列分析。
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引用本文的文献

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Arch Virol. 1995;140(12):2227-41. doi: 10.1007/BF01323242.
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猿猴疱疹病毒SA 8基因组独特短区域的基因定位与序列分析。
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