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用于核磁共振弛豫测量的蛋白质中芳香族侧链的生物合成13C标记

Biosynthetic 13C labeling of aromatic side chains in proteins for NMR relaxation measurements.

作者信息

Teilum Kaare, Brath Ulrika, Lundström Patrik, Akke Mikael

机构信息

Department of Biophysical Chemistry, Lund University, Sweden.

出版信息

J Am Chem Soc. 2006 Mar 1;128(8):2506-7. doi: 10.1021/ja055660o.

Abstract

Site-specific 13C labeling offers a desirable means of eliminating unwanted relaxation pathways and coherent magnetization transfer in NMR relaxation experiments. Here we use [1-13C]-glucose as the sole carbon source in the growth media for protein overexpression in Escherichia coli. The approach results in specific incorporation of 13C at isolated positions in the side chains of aromatic amino acids, which greatly simplifies the measurements and interpretation of 13C relaxation rates in these spin systems. The method is well suited for characterization of chemical exchange by CPMG or spin-lock relaxation methods. We validated the method by acquiring 13C rotating-frame relaxation dispersion data on the E140Q mutant of the C-terminal domain of calmodulin, which reveal conformational exchange dynamics with a time constant of 71 mus for Y138.

摘要

位点特异性13C标记为在核磁共振弛豫实验中消除不必要的弛豫途径和相干磁化转移提供了一种理想的方法。在这里,我们使用[1-13C]-葡萄糖作为大肠杆菌中蛋白质过表达生长培养基中的唯一碳源。该方法导致13C特异性掺入芳香族氨基酸侧链的孤立位置,这极大地简化了这些自旋系统中13C弛豫率的测量和解释。该方法非常适合通过CPMG或自旋锁定弛豫方法表征化学交换。我们通过获取钙调蛋白C末端结构域E140Q突变体的13C旋转框架弛豫色散数据验证了该方法,该数据揭示了Y138的构象交换动力学,时间常数为71微秒。

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