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一种研究4',6-二脒基-2-苯基吲哚(DAPI)在不同pH值下光物理行为的分子方法。

A molecular approach to 4',6-diamidine-2-phenylindole (DAPI) photophysical behaviour at different pH values.

作者信息

Barcellona M L, Gratton E

机构信息

Department of Physics, University of Illinois, Urbana-Champaign 61801.

出版信息

Biophys Chem. 1991 Jul;40(3):223-9. doi: 10.1016/0301-4622(91)80022-j.

DOI:10.1016/0301-4622(91)80022-j
PMID:1655085
Abstract

The photophysical mechanisms which determine the spectral properties and decay rates of 4',6-diamidine-2-phenylindole (DAPI) in solution and in association with nucleic acids have not yet been fully elucidated. We have performed steady-state and time-resolved fluorescence experiments on DAPI in a wide pH range to investigate the hypothesis that different ground-state conformations are responsible for the photophysical properties of the probe. Several excited-state mechanisms are investigated and it is concluded that among the proposed models, the hypothesis of ground-state heterogeneity with rapid interconversion among conformations is the only one consistent with the experiments in the entire pH range investigated.

摘要

决定4',6-二脒基-2-苯基吲哚(DAPI)在溶液中以及与核酸结合时的光谱特性和衰减速率的光物理机制尚未完全阐明。我们在很宽的pH范围内对DAPI进行了稳态和时间分辨荧光实验,以研究不同基态构象决定该探针光物理性质的假说。研究了几种激发态机制,得出的结论是,在所提出的模型中,基态具有构象间快速相互转化的不均一性这一假说是唯一与在所研究的整个pH范围内的实验结果相一致的。

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A molecular approach to 4',6-diamidine-2-phenylindole (DAPI) photophysical behaviour at different pH values.一种研究4',6-二脒基-2-苯基吲哚(DAPI)在不同pH值下光物理行为的分子方法。
Biophys Chem. 1991 Jul;40(3):223-9. doi: 10.1016/0301-4622(91)80022-j.
2
The fluorescence properties of a DNA probe. 4'-6-Diamidino-2-phenylindole (DAPI).一种DNA探针的荧光特性。4'-6-二脒基-2-苯基吲哚(DAPI)。
Eur Biophys J. 1990;17(6):315-23. doi: 10.1007/BF00258380.
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Time-resolved fluorescence of DAPI in solution and bound to polydeoxynucleotides.溶液中及与多脱氧核苷酸结合的DAPI的时间分辨荧光。
Biochem Biophys Res Commun. 1990 Jul 16;170(1):270-80. doi: 10.1016/0006-291x(90)91270-3.
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Excited-state solvation and proton transfer dynamics of DAPI in biomimetics and genomic DNA.二氨基苯基吲哚(DAPI)在仿生学和基因组DNA中的激发态溶剂化及质子转移动力学
J Phys Chem A. 2008 Aug 14;112(32):7314-20. doi: 10.1021/jp801778e. Epub 2008 Jul 22.
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DAPI fluorescence decay process: a global analytical approach proves a ground-state heterogeneity with interconversion.DAPI荧光衰减过程:一种全局分析方法证明了具有相互转换的基态异质性。
Ital J Biochem. 1990 May-Jun;39(3):179A-181A.
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An investigation of the photophysical properties of minor groove bound and intercalated DAPI through quantum-mechanical and spectroscopic tools.通过量子力学和光谱学工具研究小沟结合和嵌入 DAPI 的光物理性质。
Phys Chem Chem Phys. 2013 Apr 7;15(13):4596-603. doi: 10.1039/c3cp44058c.
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Interaction of DAPI with pepsin as a function of pH and ionic strength.作为pH值和离子强度函数的DAPI与胃蛋白酶的相互作用。
Biophys Chem. 1997 Sep 1;67(1-3):65-74. doi: 10.1016/s0301-4622(97)00015-x.
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Dynamics in the DNA recognition by DAPI: exploration of the various binding modes.4',6-二脒基-2-苯基吲哚(DAPI)对DNA识别的动力学:多种结合模式的探索
J Phys Chem B. 2008 Jan 24;112(3):1016-21. doi: 10.1021/jp077090f. Epub 2008 Jan 3.
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DAPI (4',6-diamidino-2-phenylindole) binds differently to DNA and RNA: minor-groove binding at AT sites and intercalation at AU sites.4',6-二脒基-2-苯基吲哚(DAPI)与DNA和RNA的结合方式不同:在AT位点以小沟结合,在AU位点以嵌入方式结合。
Biochemistry. 1992 Mar 31;31(12):3103-12. doi: 10.1021/bi00127a010.
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Fluorescent complexes of DNA with DAPI 4',6-diamidine-2-phenyl indole.2HCl or DCI 4',6-dicarboxyamide-2-phenyl indole.DNA与4',6-二脒基-2-苯基吲哚二盐酸盐(DAPI)或4',6-二羧酰胺-2-苯基吲哚(DCI)的荧光复合物。
Nucleic Acids Res. 1978 Oct;5(10):3775-99. doi: 10.1093/nar/5.10.3775.

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