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南非视网膜色素变性患者中RP1热点区域的新型变异

Novel variants in the hotspot region of RP1 in South African patients with retinitis pigmentosa.

作者信息

Roberts Lisa, Bartmann Lecia, Ramesar Rajkumar, Greenberg Jacquie

机构信息

Division of Human Genetics, Department of Clinical Laboratory Sciences, Faculty of Health Sciences, University of Cape Town, Cape Town, South Africa.

出版信息

Mol Vis. 2006 Mar 15;12:177-83.

Abstract

PURPOSE

Mutations in the hotspot of RP1 are reportedly responsible for 4-7% of autosomal dominant retinitis pigmentosa (ADRP) in the United States, Canada, and Europe. South Africa (SA) has unique subpopulations and a comparatively low observed frequency of rhodopsin mutations, which lead to this investigation of the contribution of RP1 mutations to the ADRP disease burden in SA.

METHODS

Fifty-seven affected, unrelated South African individuals with ADRP were selected for mutation screening of the RP1 hotspot, using denaturing high performance liquid chromatography (HPLC). Variants were identified by direct sequencing, after which cosegregation analysis and population frequency studies were performed using restriction fragment length polymorphism analysis, nondenaturing HPLC, or denaturing HPLC.

RESULTS

Three mutations were identified, including two novel sequence variations and the common Arg677X mutation. A wide spectrum of disease severity was observed in the families with these RP1 gene mutations. Two nondisease-associated polymorphisms were also detected, with the frequency of one of these variants being significantly low in Black African individuals.

CONCLUSIONS

Mutations were only found in Caucasian families with origins in the British Isles. The observed RP1 mutation frequency of 5.3% in SA ADRP patients is comparable to the frequency reported in other populations.

摘要

目的

据报道,在美国、加拿大和欧洲,RP1热点区域的突变导致4% - 7%的常染色体显性视网膜色素变性(ADRP)。南非(SA)有独特的亚群体,且视紫红质突变的观察频率相对较低,这促使我们对RP1突变在南非ADRP疾病负担中的作用进行研究。

方法

选取57名患有ADRP的无亲缘关系的南非患者,采用变性高效液相色谱法(HPLC)对RP1热点区域进行突变筛查。通过直接测序鉴定变异,之后使用限制性片段长度多态性分析、非变性HPLC或变性HPLC进行共分离分析和群体频率研究。

结果

鉴定出三个突变,包括两个新的序列变异和常见的Arg677X突变。在这些携带RP1基因突变的家族中观察到了广泛的疾病严重程度谱。还检测到两个与疾病无关的多态性,其中一个变异在非洲黑人个体中的频率显著较低。

结论

仅在有不列颠群岛血统的白人家族中发现了突变。在南非ADRP患者中观察到的RP1突变频率为5.3%,与其他人群报道的频率相当。

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