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体外反义RNA对前体mRNA剪接的抑制作用:含外显子互补序列的RNA的效应

Inhibition of pre-mRNA splicing by antisense RNA in vitro: effect of RNA containing sequences complementary to exons.

作者信息

Volloch V, Schweitzer B, Rits S

机构信息

Department of Metabolic Regulation, Boston Biomedical Research Institute, MA 02114.

出版信息

Biochem Biophys Res Commun. 1991 Sep 30;179(3):1593-9. doi: 10.1016/0006-291x(91)91756-3.

DOI:10.1016/0006-291x(91)91756-3
PMID:1656959
Abstract

The objective of the experiments described in this paper was to determine the feasibility of inhibition of pre-mRNA splicing by antisense RNA in vitro. Three different types of antisense RNA were utilized: antisense RNA complementary to the spliced RNA molecule; antisense RNA complementary to the unprocessed mRNA precursor molecule; and antisense RNA complementary to the 5' and 3' splice junctions. Whereas antisense RNA complementary to mRNA had little effect on splicing, antisense RNAs complementary to mRNA precursor or to splice junctions strongly inhibited splicing of pre-mRNA molecule. The results obtained indicate that the inhibitory effect is most likely due to hybrid formation between pre-mRNA and antisense RNA molecules and that antisense RNA complementary to the exon portion but not to the intron portion of splice junction exhibit an inhibitory effect. This inhibition can be overcome by bringing together 5' and 3' splice junctions via hybrid formation with antisense RNA complementary to the spliced RNA molecule.

摘要

本文所述实验的目的是确定体外反义RNA抑制前体mRNA剪接的可行性。使用了三种不同类型的反义RNA:与剪接后的RNA分子互补的反义RNA;与未加工的mRNA前体分子互补的反义RNA;以及与5'和3'剪接连接点互补的反义RNA。与mRNA互补的反义RNA对剪接几乎没有影响,而与mRNA前体或剪接连接点互补的反义RNA强烈抑制前体mRNA分子的剪接。所得结果表明,抑制作用很可能是由于前体mRNA与反义RNA分子之间形成杂交体,并且与剪接连接点的外显子部分而非内含子部分互补的反义RNA表现出抑制作用。通过与与剪接后的RNA分子互补的反义RNA形成杂交体,将5'和3'剪接连接点聚集在一起,可以克服这种抑制作用。

相似文献

1
Inhibition of pre-mRNA splicing by antisense RNA in vitro: effect of RNA containing sequences complementary to exons.体外反义RNA对前体mRNA剪接的抑制作用:含外显子互补序列的RNA的效应
Biochem Biophys Res Commun. 1991 Sep 30;179(3):1593-9. doi: 10.1016/0006-291x(91)91756-3.
2
Inhibition of pre-mRNA splicing by antisense RNA in vitro: effect of RNA containing sequences complementary to introns.体外反义RNA对前体mRNA剪接的抑制作用:含与内含子互补序列的RNA的效应
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Surveying cis-acting sequences of pre-mRNA by adding antisense 2'-O-methyl oligoribonucleotides to a splicing reaction.通过向剪接反应中添加反义2'-O-甲基寡核糖核苷酸来检测前体mRNA的顺式作用序列。
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The length of the downstream exon and the substitution of specific sequences affect pre-mRNA splicing in vitro.下游外显子的长度以及特定序列的替换会在体外影响前体mRNA的剪接。
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Modulation of in vitro splicing of the upstream intron by modifying an intra-exon sequence which is deleted from the dystrophin gene in dystrophin Kobe.通过修饰肌营养不良蛋白神户型中从肌营养不良蛋白基因中缺失的外显子内序列来调节上游内含子的体外剪接。
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Beta-globin transcripts carrying a single intron with three adjacent nucleotides of 5' exon are efficiently spliced in vitro irrespective of intron position or surrounding exon sequences.携带单个内含子且该内含子与5'外显子的三个相邻核苷酸相连的β-珠蛋白转录本,无论内含子位置或周围外显子序列如何,在体外都能高效剪接。
Nucleic Acids Res. 1990 Aug 25;18(16):4671-6. doi: 10.1093/nar/18.16.4671.

引用本文的文献

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BMC Biochem. 2001;2:3. doi: 10.1186/1471-2091-2-3. Epub 2001 Mar 21.
2
Conditional inhibition of beta-glucuronidase expression by antisense gene fragments in petunia protoplasts.矮牵牛原生质体中反义基因片段对β-葡萄糖醛酸酶表达的条件性抑制
Plant Mol Biol. 1993 Oct;23(1):45-55. doi: 10.1007/BF00021418.
3
Targeted nuclear antisense RNA mimics natural antisense-induced degradation of polyoma virus early RNA.
Proc Natl Acad Sci U S A. 1994 May 10;91(10):4258-62. doi: 10.1073/pnas.91.10.4258.
4
Modulation of in vitro splicing of the upstream intron by modifying an intra-exon sequence which is deleted from the dystrophin gene in dystrophin Kobe.通过修饰肌营养不良蛋白神户型中从肌营养不良蛋白基因中缺失的外显子内序列来调节上游内含子的体外剪接。
J Clin Invest. 1995 Feb;95(2):515-20. doi: 10.1172/JCI117693.