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在具有剪接能力的HeLa细胞核提取物中,β-珠蛋白前体信使RNA的5'和3'剪接位点的酶切可及性差异

Differential enzymatic accessibilities of the 5' and 3' splice sites of beta-globin pre-messenger RNA in splicing competent HeLa cell nuclear extract.

作者信息

Siegall C B, Kumar A

机构信息

Department of Biochemistry, George Washington University School of Medicine and Health Sciences, Washington D.C. 20037.

出版信息

Biochem Biophys Res Commun. 1988 Jan 29;150(2):517-25. doi: 10.1016/0006-291x(88)90424-x.

DOI:10.1016/0006-291x(88)90424-x
PMID:2829876
Abstract

Inhibition of oligonucleotide-directed cleavage of pre-mRNA using exogenously added E. coli RNase H has been utilized as a probe for mRNA-protein interaction. We now show that such an RNase H-like activity is present in splicing competent Hela cell nuclear extract. Using this extract and in vitro transcribed beta-globin pre-mRNA, we have demonstrated that synthetic oligonucleotides, complementary to the splice site sequences, direct preferential cleavage of the 5' splice site. Thus, these experiments using complementary oligonucleotide-directed, endogenous RNase H-like cleavage of pre-mRNA, suggest a useful probe for studying the mRNA-protein complex in vitro.

摘要

利用外源添加的大肠杆菌核糖核酸酶H抑制前体mRNA的寡核苷酸定向切割,已被用作mRNA-蛋白质相互作用的探针。我们现在表明,在具有剪接能力的海拉细胞核提取物中存在这种类似核糖核酸酶H的活性。利用这种提取物和体外转录的β-珠蛋白前体mRNA,我们已经证明,与剪接位点序列互补的合成寡核苷酸可引导对5'剪接位点的优先切割。因此,这些使用互补寡核苷酸定向的、内源性前体mRNA的核糖核酸酶H样切割的实验,提示了一种用于体外研究mRNA-蛋白质复合物的有用探针。

相似文献

1
Differential enzymatic accessibilities of the 5' and 3' splice sites of beta-globin pre-messenger RNA in splicing competent HeLa cell nuclear extract.在具有剪接能力的HeLa细胞核提取物中,β-珠蛋白前体信使RNA的5'和3'剪接位点的酶切可及性差异
Biochem Biophys Res Commun. 1988 Jan 29;150(2):517-25. doi: 10.1016/0006-291x(88)90424-x.
2
RNase H cleavage of RNA hybridized to oligonucleotides containing methylphosphonate, phosphorothioate and phosphodiester bonds.核糖核酸酶H对与含有甲基膦酸酯、硫代磷酸酯和磷酸二酯键的寡核苷酸杂交的RNA的切割作用。
Nucleic Acids Res. 1989 Nov 25;17(22):9193-204. doi: 10.1093/nar/17.22.9193.
3
A 62,000 molecular weight spliceosome protein crosslinks to the intron polypyrimidine tract.一种分子量为62,000的剪接体蛋白与内含子多嘧啶序列交联。
Nucleic Acids Res. 1990 Oct 25;18(20):5995-6001. doi: 10.1093/nar/18.20.5995.
4
Heat treatment of nuclear extract alters selection of the 3' splice site in pre-mRNA splicing.核提取物的热处理会改变前体信使核糖核酸剪接过程中3'剪接位点的选择。
Biochem Biophys Res Commun. 1993 Jan 15;190(1):223-8. doi: 10.1006/bbrc.1993.1034.
5
Reconstituted U1 small nuclear ribonucleoprotein complex restores 5' splice site cleavage activity.重组的U1小核核糖核蛋白复合体可恢复5'剪接位点切割活性。
Biochem Biophys Res Commun. 1988 Aug 15;154(3):1010-7. doi: 10.1016/0006-291x(88)90240-9.
6
Identification of sites of pre-MRNA/spliceosome association.前体mRNA/剪接体结合位点的鉴定
SAAS Bull Biochem Biotechnol. 1991 Jan;4:76-80.
7
Inhibition of pre-mRNA splicing by antisense RNA in vitro: effect of RNA containing sequences complementary to exons.体外反义RNA对前体mRNA剪接的抑制作用:含外显子互补序列的RNA的效应
Biochem Biophys Res Commun. 1991 Sep 30;179(3):1593-9. doi: 10.1016/0006-291x(91)91756-3.
8
Substitution of pre-mRNA with phosphorothioate linkages reveals a new splicing-related reaction.用硫代磷酸酯键取代前体mRNA揭示了一种新的剪接相关反应。
J Biol Chem. 1988 Sep 5;263(25):12295-304.
9
Antisense RNA inhibits splicing of pre-mRNA in vitro.反义RNA在体外抑制前体mRNA的剪接。
EMBO J. 1988 Aug;7(8):2523-32. doi: 10.1002/j.1460-2075.1988.tb03100.x.
10
Inhibition of splicing but not cleavage at the 5' splice site by truncating human beta-globin pre-mRNA.通过截短人β-珠蛋白前体mRNA抑制5'剪接位点的剪接而非切割。
Proc Natl Acad Sci U S A. 1986 Feb;83(4):927-31. doi: 10.1073/pnas.83.4.927.