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脊椎动物嗅觉及其他化学感应受体基因的进化动力学

Evolutionary dynamics of olfactory and other chemosensory receptor genes in vertebrates.

作者信息

Niimura Yoshihito, Nei Masatoshi

机构信息

Department of Bioinformatics, Medical Research Institute, Tokyo Medical and Dental University, 1-5-45 Yushima, Bunkyo-ku, Tokyo 113-8510, Japan.

Institute of Molecular Evolutionary Genetics and Department of Biology, Pennsylvania State University, 328 Mueller Laboratory, University Park, PA, 16802, USA.

出版信息

J Hum Genet. 2006;51(6):505-517. doi: 10.1007/s10038-006-0391-8. Epub 2006 Apr 11.

Abstract

The numbers of functional olfactory receptor (OR) genes in humans and mice are about 400 and 1,000 respectively. In both humans and mice, these genes exist as genomic clusters and are scattered over almost all chromosomes. The difference in the number of genes between the two species is apparently caused by massive inactivation of OR genes in the human lineage and a substantial increase of OR genes in the mouse lineage after the human-mouse divergence. Compared with mammals, fishes have a much smaller number of OR genes. However, the OR gene family in fishes is much more divergent than that in mammals. Fishes have many different groups of genes that are absent in mammals, suggesting that the mammalian OR gene family is characterized by the loss of many group genes that existed in the ancestor of vertebrates and the subsequent expansion of specific groups of genes. Therefore, this gene family apparently changed dynamically depending on the evolutionary lineage and evolved under the birth-and-death model of evolution. Study of the evolutionary changes of two gene families for vomeronasal receptors and two gene families for taste receptors, which are structurally similar, but remotely related to OR genes, showed that some of the gene families evolved in the same fashion as the OR gene family. It appears that the number and types of genes in chemosensory receptor gene families have evolved in response to environmental needs, but they are also affected by fortuitous factors.

摘要

人类和小鼠中功能性嗅觉受体(OR)基因的数量分别约为400个和1000个。在人类和小鼠中,这些基因均以基因组簇的形式存在,并散布在几乎所有染色体上。这两个物种之间基因数量的差异显然是由于人类谱系中OR基因的大量失活以及人类与小鼠分化后小鼠谱系中OR基因的大量增加所致。与哺乳动物相比,鱼类的OR基因数量要少得多。然而,鱼类的OR基因家族比哺乳动物的更加多样化。鱼类有许多哺乳动物所没有的不同基因群,这表明哺乳动物的OR基因家族的特征是许多存在于脊椎动物祖先中的基因群的丧失以及随后特定基因群的扩张。因此,这个基因家族显然根据进化谱系动态变化,并在进化的生死模型下进化。对犁鼻器受体的两个基因家族和味觉受体的两个基因家族的进化变化进行研究,这些基因家族结构相似,但与OR基因的关系较远,结果表明其中一些基因家族与OR基因家族以相同的方式进化。化学感应受体基因家族中的基因数量和类型似乎是为了响应环境需求而进化的,但它们也受到偶然因素的影响。

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