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从中国酸性土壤中分离得到的耐中性嗜酸链霉菌新物种:官渡链霉菌、少孢链霉菌、红链霉菌和杨林链霉菌。

Neutrotolerant acidophilic Streptomyces species isolated from acidic soils in China: Streptomyces guanduensis sp. nov., Streptomyces paucisporeus sp. nov., Streptomyces rubidus sp. nov. and Streptomyces yanglinensis sp. nov.

作者信息

Xu Chunguang, Wang Liming, Cui Qingfeng, Huang Ying, Liu Zhiheng, Zheng Guangyu, Goodfellow Michael

机构信息

College of Life Sciences, Beijing Normal University, Beijing 100875, People's Republic of China.

State Key Laboratory of Microbial Resources, Institute of Microbiology, Chinese Academy of Sciences, Beijing 100080, People's Republic of China.

出版信息

Int J Syst Evol Microbiol. 2006 May;56(Pt 5):1109-1115. doi: 10.1099/ijs.0.63959-0.

Abstract

The taxonomic status of six neutrotolerant acidophilic streptomycetes isolated from acidic soils in Yunnan Province, China, was established using a polyphasic approach. The morphological and chemotaxonomic characteristics revealed that the isolates belong to the genus Streptomyces. Almost complete 16S rRNA gene sequences of the isolates were determined and aligned with available corresponding sequences of representatives of the family Streptomycetaceae; phylogenetic trees were inferred using four tree-making algorithms. The isolates formed a distinct, albeit heterogeneous, subclade in the Streptomyces 16S rRNA gene tree together with the type strain of Streptomyces yeochonensis, but were readily distinguishable from the latter using DNA-DNA hybridization and phenotypic data. It was evident from the genotypic and phenotypic data that the isolates belonged to four novel Streptomyces species, for which the following names are proposed: Streptomyces guanduensis sp. nov. (type strain 701T=CGMCC 4.2022T=JCM 13274T), Streptomyces paucisporeus sp. nov. (type strain 1413T=CGMCC 4.2025T=JCM 13276T), Streptomyces rubidus sp. nov. (type strain 13c15T=CGMCC 4.2026T=JCM 13277T) and Streptomyces yanglinensis sp. nov. (type strain 1307T=CGMCC 4.2023T=JCM 13275T); isolates 317 and 913 belong to this latter species.

摘要

采用多相分类方法确定了从中国云南省酸性土壤中分离出的6株耐中性嗜酸链霉菌的分类地位。形态学和化学分类学特征表明,这些分离株属于链霉菌属。测定了分离株几乎完整的16S rRNA基因序列,并与链霉菌科代表菌株的可用相应序列进行比对;使用四种建树算法推断系统发育树。这些分离株在链霉菌16S rRNA基因树中与永川链霉菌模式菌株形成了一个独特的亚分支,尽管该亚分支具有异质性,但通过DNA-DNA杂交和表型数据很容易与后者区分开来。从基因型和表型数据可以明显看出,这些分离株属于4个新的链霉菌物种,为此提出以下名称:官渡链霉菌(Streptomyces guanduensis)新种(模式菌株701T = CGMCC 4.2022T = JCM 13274T)、少孢链霉菌(Streptomyces paucisporeus)新种(模式菌株1413T = CGMCC 4.2025T = JCM 13276T)、红链霉菌(Streptomyces rubidus)新种(模式菌株13c15T = CGMCC 4.2026T = JCM 13277T)和杨林链霉菌(Streptomyces yanglinensis)新种(模式菌株1307T = CGMCC 4.2023T = JCM 13275T);分离株317和913属于后一个物种。

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