• 文献检索
  • 文档翻译
  • 深度研究
  • 学术资讯
  • Suppr Zotero 插件Zotero 插件
  • 邀请有礼
  • 套餐&价格
  • 历史记录
应用&插件
Suppr Zotero 插件Zotero 插件浏览器插件Mac 客户端Windows 客户端微信小程序
定价
高级版会员购买积分包购买API积分包
服务
文献检索文档翻译深度研究API 文档MCP 服务
关于我们
关于 Suppr公司介绍联系我们用户协议隐私条款
关注我们

Suppr 超能文献

核心技术专利:CN118964589B侵权必究
粤ICP备2023148730 号-1Suppr @ 2026

文献检索

告别复杂PubMed语法,用中文像聊天一样搜索,搜遍4000万医学文献。AI智能推荐,让科研检索更轻松。

立即免费搜索

文件翻译

保留排版,准确专业,支持PDF/Word/PPT等文件格式,支持 12+语言互译。

免费翻译文档

深度研究

AI帮你快速写综述,25分钟生成高质量综述,智能提取关键信息,辅助科研写作。

立即免费体验

采用单位分解近似的二阶莫雷尔-普列斯特定理能量与梯度的分布式内存并行实现

Distributed memory parallel implementation of energies and gradients for second-order Møller-Plesset perturbation theory with the resolution-of-the-identity approximation.

作者信息

Hättig Christof, Hellweg Arnim, Köhn Andreas

机构信息

Forschungszentrum Karlsruhe, Institute of Nanotechnology, P. O. Box 3640, D-76021, Karlsruhe, Germany.

出版信息

Phys Chem Chem Phys. 2006 Mar 14;8(10):1159-69. doi: 10.1039/b515355g. Epub 2006 Jan 31.

DOI:10.1039/b515355g
PMID:16633596
Abstract

We present a parallel implementation of second-order Møller-Plesset perturbation theory with the resolution-of-the-identity approximation (RI-MP2). The implementation is based on a recent improved sequential implementation of RI-MP2 within the Turbomole program package and employs the message passing interface (MPI) standard for communication between distributed memory nodes. The parallel implementation extends the applicability of canonical MP2 to considerably larger systems. Examples are presented for full geometry optimizations with up to 60 atoms and 3300 basis functions and MP2 energy calculations with more than 200 atoms and 7000 basis functions.

摘要

我们展示了一种采用单位分解近似(RI-MP2)的二阶莫勒-普莱塞特微扰理论的并行实现。该实现基于Turbomole程序包中最近改进的RI-MP2顺序实现,并采用消息传递接口(MPI)标准进行分布式内存节点之间的通信。这种并行实现将正则MP2的适用性扩展到了大得多的系统。给出了多达60个原子和3300个基函数的全几何优化以及超过200个原子和7000个基函数的MP2能量计算的示例。

相似文献

1
Distributed memory parallel implementation of energies and gradients for second-order Møller-Plesset perturbation theory with the resolution-of-the-identity approximation.采用单位分解近似的二阶莫雷尔-普列斯特定理能量与梯度的分布式内存并行实现
Phys Chem Chem Phys. 2006 Mar 14;8(10):1159-69. doi: 10.1039/b515355g. Epub 2006 Jan 31.
2
Application of second-order Møller-Plesset perturbation theory with resolution-of-identity approximation to periodic systems.二阶微扰理论与含解析近似的完全活性空间自洽场方法在周期性体系中的应用。
J Chem Phys. 2010 Nov 14;133(18):184103. doi: 10.1063/1.3503153.
3
A hybrid scheme for the resolution-of-the-identity approximation in second-order Møller-Plesset linear-r(12) perturbation theory.二阶莫勒-普莱斯特定理线性r(12)微扰理论中恒等式近似解析的混合方案。
J Chem Phys. 2004 Jun 15;120(23):10890-5. doi: 10.1063/1.1742904.
4
Dual-basis second-order Moller-Plesset perturbation theory: A reduced-cost reference for correlation calculations.双基二阶莫勒-普莱塞特微扰理论:关联计算的低成本参考方法。
J Chem Phys. 2006 Aug 21;125(7):074108. doi: 10.1063/1.2234371.
5
An improved algorithm for analytical gradient evaluation in resolution-of-the-identity second-order Møller-Plesset perturbation theory: application to alanine tetrapeptide conformational analysis.一种用于恒等式二阶莫勒-普莱塞特微扰理论中解析梯度评估的改进算法:应用于丙氨酸四肽构象分析。
J Comput Chem. 2007 Apr 15;28(5):839-56. doi: 10.1002/jcc.20604.
6
Second-order Møller-Plesset theory with linear R12 terms (MP2-R12) revisited: auxiliary basis set method and massively parallel implementation.二阶Møller-Plesset理论与线性R12项(MP2-R12)再探讨:辅助基组方法与大规模并行实现
J Chem Phys. 2004 Jul 15;121(3):1214-27. doi: 10.1063/1.1759319.
7
The molecular gradient using the divide-expand-consolidate resolution of the identity second-order Møller-Plesset perturbation theory: The DEC-RI-MP2 gradient.使用恒等二阶莫雷尔-普莱塞特微扰理论的划分-扩展-合并分辨率的分子梯度:DEC-RI-MP2梯度
J Chem Phys. 2016 Jul 14;145(2):024106. doi: 10.1063/1.4956454.
8
Analytic calculation of first-order molecular properties at the explicitly correlated second-order Moller-Plesset level: basis-set limits for the molecular quadrupole moments of BH and HF.在显式相关的二级莫勒-普列斯特定则水平上对一阶分子性质进行解析计算:BH和HF分子四极矩的基组极限
J Chem Phys. 2005 Jun 1;122(21):214306. doi: 10.1063/1.1924591.
9
Analytical energy gradients for local second-order Møller-Plesset perturbation theory using density fitting approximations.使用密度拟合近似的局部二阶莫勒-普莱斯特定理微扰理论的解析能量梯度。
J Chem Phys. 2004 Jul 8;121(2):737-50. doi: 10.1063/1.1760747.
10
Second-order Møller-Plesset perturbation theory applied to extended systems. I. Within the projector-augmented-wave formalism using a plane wave basis set.应用于扩展体系的二阶莫勒-普莱塞特微扰理论。I. 在使用平面波基组的投影增强波形式体系内。
J Chem Phys. 2009 May 14;130(18):184103. doi: 10.1063/1.3126249.

引用本文的文献

1
Comparison of QM Methods for the Evaluation of Halogen-π Interactions for Large-Scale Data Generation.用于大规模数据生成的卤素-π相互作用评估的量子力学方法比较
J Chem Theory Comput. 2025 Jun 24;21(12):6174-6183. doi: 10.1021/acs.jctc.5c00456. Epub 2025 Jun 9.
2
Simultaneous Multi-Resonant Thermally Activated Delayed Fluorescence and Room Temperature Phosphorescence from Biluminescent Nitrogen-Containing Indolocarbazoles.双发光含氮吲哚咔唑的同步多共振热激活延迟荧光和室温磷光
Adv Sci (Weinh). 2025 Aug;12(29):e03175. doi: 10.1002/advs.202503175. Epub 2025 May 14.
3
Nonempirical Adiabatic Connection Correlation Functional from Hartree-Fock Orbitals.
基于哈特里-福克轨道的非经验绝热连接相关泛函
J Phys Chem Lett. 2025 Apr 3;16(13):3378-3388. doi: 10.1021/acs.jpclett.4c03593. Epub 2025 Mar 26.
4
Speciation of Tc-Gluconate Complexes in Aqueous Systems.水体系中锝-葡萄糖酸盐配合物的物种形成
Inorg Chem. 2025 Mar 24;64(11):5412-5423. doi: 10.1021/acs.inorgchem.4c05115. Epub 2025 Mar 9.
5
Analytic Gradients for Density Fitting MP2 Using Natural Auxiliary Functions.使用自然辅助函数的密度拟合MP2的解析梯度
J Phys Chem A. 2024 Aug 8;128(31):6566-6580. doi: 10.1021/acs.jpca.4c02822. Epub 2024 Jul 29.
6
Characterization of the Coordination and Solvation Dynamics of Solvated Systems─Implications for the Analysis of Molecular Interactions in Solutions and Pure HO.溶剂化体系的配位与溶剂化动力学表征——对溶液和纯水中分子相互作用分析的启示
J Chem Theory Comput. 2024 Apr 23;20(8):3028-3045. doi: 10.1021/acs.jctc.4c00162. Epub 2024 Apr 10.
7
Temperature effects on the internal conversion of excited adenine and adenosine.温度对激发态腺嘌呤和腺苷内转换的影响。
Phys Chem Chem Phys. 2023 Oct 18;25(40):27083-27093. doi: 10.1039/d3cp03234e.
8
Corrigendum: Coupled cluster theory on modern heterogeneous supercomputers.勘误:现代异构超级计算机上的耦合簇理论。
Front Chem. 2023 Aug 15;11:1256510. doi: 10.3389/fchem.2023.1256510. eCollection 2023.
9
Coupled cluster theory on modern heterogeneous supercomputers.现代异构超级计算机上的耦合簇理论
Front Chem. 2023 Jun 14;11:1154526. doi: 10.3389/fchem.2023.1154526. eCollection 2023.
10
TURBOMOLE: Today and Tomorrow.TURBOMOLE:今日与明日。
J Chem Theory Comput. 2023 Oct 24;19(20):6859-6890. doi: 10.1021/acs.jctc.3c00347. Epub 2023 Jun 29.