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关于裸铝离子和水合铝离子与核酸碱基(尿嘧啶、胸腺嘧啶、胞嘧啶、腺嘌呤、鸟嘌呤)及单磷酸核苷酸(尿苷单磷酸、脱氧胸苷单磷酸、脱氧胞苷单磷酸、脱氧腺苷单磷酸、脱氧鸟苷单磷酸)的相互作用。

On the interaction of bare and hydrated aluminum ion with nucleic acid bases (U, T, C, A, G) and monophosphate nucleotides (UMP, dTMP, dCMP, dAMP, dGMP).

作者信息

Mazzuca Donatella, Russo Nino, Toscano Marirosa, Grand André

机构信息

Dipartimento di Chimica and Centro di Calcolo ad Alte Prestazioni per Elaborazioni Parallele e Distribuite-Centro d'Eccellenza MURST, Università della Calabria, I-87030 Arcavacata di Rende (CS), Italy.

出版信息

J Phys Chem B. 2006 May 4;110(17):8815-24. doi: 10.1021/jp055223w.

Abstract

The B3LYP/6-311+G(2df,2p) density functional approach was used to study the interaction that aluminum trication, in the bare and hydrated forms, establishes with the nucleic acid bases and the corresponding monophosphate nucleotides. In this investigation, we determine equilibrium geometry of all possible complexes resulting from the attachment of the ion on the different binding sites selected on each ligand. The relative energies of complexes and metal ion affinities are also given. The most meaningful aspect was found to lie in the energetics of this interaction that underlines a very high affinity of aluminum ion for the examined biological systems.

摘要

采用B3LYP/6-311+G(2df,2p)密度泛函方法研究了裸态和水合态三价铝离子与核酸碱基及相应单磷酸核苷酸之间的相互作用。在本研究中,我们确定了离子附着在每个配体上所选不同结合位点后形成的所有可能配合物的平衡几何结构。还给出了配合物的相对能量和金属离子亲和力。发现最有意义的方面在于这种相互作用的能量学,它突出了铝离子对所研究生物体系的极高亲和力。

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