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在AEC综合征中鉴定出的p63 SAM结构域的核磁共振结构以及G534V和T537P病理突变体的动力学特性。

NMR structure of the p63 SAM domain and dynamical properties of G534V and T537P pathological mutants, identified in the AEC syndrome.

作者信息

Cicero Daniel O, Falconi Mattia, Candi Eleonora, Mele Sonia, Cadot Bruno, Di Venere Almerinda, Rufini Stefano, Melino Gerry, Desideri Alessandro

机构信息

Department of Science and Chemical Technologies, University of Rome Tor Vergata, Rome, Italy.

出版信息

Cell Biochem Biophys. 2006;44(3):475-89. doi: 10.1385/CBB:44:3:475.

Abstract

The p63 protein is crucial for epidermal development, and its mutations cause the extrodactyly ectodermal dysplasia and cleft lip/palate syndrome. The three-dimensional solution structure of the p63 sterile alpha-motif (SAM) domain (residues 505-579), a region crucial to explaining the human genetic disease ankyloblepharonectodermal dysplasia-clefting syndrome (AEC), has been determined by nuclear magnetic resonance spectroscopy. The structure indicates that the domain is a monomer with the characteristic five-helix bundle topology observed in other SAM domains. It includes five tightly packed helices with an extended hydrophobic core to form a globular and compact structure. The dynamics of the backbone and the global correlation time of the molecule have also been investigated and compared with the dynamical properties obtained through molecular dynamics simulation. Attempts to purify the pathological G534V and T537P mutants, originally identified in AEC, were not successful because of the occurrence of unspecific proteolytic degradation of the mutated SAM domains. Analysis of the structural dynamic properties of the G534V and T537P mutants through molecular dynamics simulation and comparison with the wild type permits detection of differences in the degree of freedom of individual residues and discussion of the possible causes for the pathology.

摘要

p63蛋白对表皮发育至关重要,其突变会导致多指(趾)-外胚层发育不良和唇腭裂综合征。p63无菌α基序(SAM)结构域(第505 - 579位氨基酸残基)的三维溶液结构已通过核磁共振光谱法确定,该区域对于解释人类遗传性疾病睑缘粘连-外胚层发育不良-腭裂综合征(AEC)至关重要。该结构表明,该结构域是一个单体,具有在其他SAM结构域中观察到的特征性五螺旋束拓扑结构。它包括五个紧密堆积的螺旋,带有一个延伸的疏水核心,形成一个球状且紧凑的结构。还研究了分子主链的动力学以及分子的全局相关时间,并与通过分子动力学模拟获得的动力学性质进行了比较。对最初在AEC中鉴定出的病理性G534V和T537P突变体进行纯化的尝试未成功,因为突变的SAM结构域发生了非特异性蛋白水解降解。通过分子动力学模拟分析G534V和T537P突变体的结构动力学性质,并与野生型进行比较,可以检测到单个残基自由度的差异,并讨论病理的可能原因。

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