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The signal in the genomes.

作者信息

Sankoff David

出版信息

PLoS Comput Biol. 2006 Apr;2(4):e35. doi: 10.1371/journal.pcbi.0020035.

Abstract
摘要

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本文引用的文献

1
Stability of rearrangement measures in the comparison of genome sequences.
J Comput Biol. 2006 Mar;13(2):554-66. doi: 10.1089/cmb.2006.13.554.
2
The fragile breakage versus random breakage models of chromosome evolution.
PLoS Comput Biol. 2006 Feb;2(2):e14. doi: 10.1371/journal.pcbi.0020014. Epub 2006 Feb 24.
3
Chromosomal breakpoint reuse in genome sequence rearrangement.
J Comput Biol. 2005 Jul-Aug;12(6):812-21. doi: 10.1089/cmb.2005.12.812.
4
Rearrangements and chromosomal evolution.
Curr Opin Genet Dev. 2003 Dec;13(6):583-7. doi: 10.1016/j.gde.2003.10.006.
5
Chromosome rearrangements in evolution: From gene order to genome sequence and back.
Proc Natl Acad Sci U S A. 2003 Sep 30;100(20):11188-9. doi: 10.1073/pnas.2035002100. Epub 2003 Sep 23.
6
Human and mouse genomic sequences reveal extensive breakpoint reuse in mammalian evolution.
Proc Natl Acad Sci U S A. 2003 Jun 24;100(13):7672-7. doi: 10.1073/pnas.1330369100. Epub 2003 Jun 16.
7
Genome rearrangements in mammalian evolution: lessons from human and mouse genomes.
Genome Res. 2003 Jan;13(1):37-45. doi: 10.1101/gr.757503.

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