Mix C, Arens P F P, Rengelink R, Smulders M J M, Van Groenendael J M, Ouborg N J
Department of Ecology, Radboud University Nijmegen, Toernooiveld 1, 6525 ED Nijmegen, The Netherlands.
Mol Ecol. 2006 Jun;15(7):1749-58. doi: 10.1111/j.1365-294X.2006.02887.x.
Using microsatellites, we investigated population structure and gene flow of the short-lived, wind-dispersed plant species Hypochaeris radicata in a fragmented agricultural landscape where more than 99% of the nutrient-poor grasslands have disappeared over the last century. We sampled populations in the few remaining high density populations in conservation areas, as well as individuals that occurred, with lower densities, in linear landscape elements, at two spatial scales. In a re-inventory of the landscape, after 3 years, both extinctions and colonizations of populations were observed. Contrary to expectations, no differences in genetic diversity between high and low density populations were observed. Both types of populations had relatively high levels of diversity. Overall genetic differentiation (theta) was 0.04 and significantly different from zero (P < 0.01). A significant isolation-by-distance pattern was found when all populations were simultaneously analysed (r = 0.24, P = 0.013). Isolation by distance was (marginally) significant at the small scale (r = 0.32, P = 0.06), whereas nonsignificant at the large spatial scale (r = -0.05, P = 0.66). A maximization-of-explained-variance procedure resulted in a threshold distance of 3.5 km above which populations were effectively genetically isolated. An additional partial exclusion Bayesian-based assignment test showed that overall 32.3% of the individuals were assigned to their population of origin, 48% were assigned to another population in the area and 19.7% were not assigned. Together, these results suggest high levels of gene flow. Seed dispersal contributes to the observed gene flow up to several hundred metres, which is higher than previously modelled using aerodynamic models on seed dispersal of H. radicata. We discuss the consequences of these results for an evaluation of the probability of persistence of this species in the fragmented landscape.
利用微卫星技术,我们研究了寿命较短、靠风力传播种子的植物物种——皱叶酸模(Hypochaeris radicata)在破碎化农业景观中的种群结构和基因流动情况。在过去的一个世纪里,这片景观中超过99%的贫瘠草原已经消失。我们在保护区内少数剩余的高密度种群中进行了采样,同时也在两个空间尺度上对线性景观要素中低密度出现的个体进行了采样。在对该景观进行3年的重新清查过程中,观察到了种群的灭绝和定殖情况。与预期相反,未观察到高密度和低密度种群之间遗传多样性的差异。两种类型的种群都具有相对较高的多样性水平。总体遗传分化(theta)为0.04,且显著不同于零(P < 0.01)。当对所有种群同时进行分析时,发现了显著的距离隔离模式(r = 0.24,P = 0.013)。距离隔离在小尺度上(r = 0.32,P = 0.06)(勉强)显著,而在大空间尺度上不显著(r = -0.05,P = 0.66)。通过解释方差最大化程序得出的阈值距离为3.5公里,超过这个距离种群在遗传上就有效隔离了。另一个基于贝叶斯的部分排除分配测试表明,总体上32.3%的个体被分配到其原生种群,48%被分配到该地区的另一个种群,19.7%未被分配。这些结果共同表明基因流动水平较高。种子传播对观察到的基因流动贡献可达数百米,这比之前使用空气动力学模型对皱叶酸模种子传播进行建模的结果要高。我们讨论了这些结果对于评估该物种在破碎化景观中持续存在概率的影响。