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肺衣(一种附生地衣)的景观尺度基因流动

Landscape-level gene flow in Lobaria pulmonaria, an epiphytic lichen.

作者信息

Werth Silke, Gugerli Felix, Holderegger Rolf, Wagner Helene H, Csencsics Daniela, Scheidegger Christoph

机构信息

WSL Swiss Federal Research Institute, Zürcherstrasse 111, CH-8903 Birmensdorf, Switzerland.

出版信息

Mol Ecol. 2007 Jul;16(13):2807-15. doi: 10.1111/j.1365-294X.2007.03344.x.

Abstract

Epiphytes are strongly affected by the population dynamics of their host trees. Owing to the spatio-temporal dynamics of host tree populations, substantial dispersal rates--corresponding to high levels of gene flow--are needed for populations to persist in a landscape. However, several epiphytic lichens have been suggested to be dispersal-limited, which leads to the expectation of low gene flow at the landscape scale. Here, we study landscape-level genetic structure and gene flow of a putatively dispersal-limited epiphytic lichen, Lobaria pulmonaria. The genetic structure of L. pulmonaria was quantified at three hierarchical levels, based on 923 thalli collected from 41 plots situated within a pasture-woodland landscape and genotyped at six fungal microsatellite loci. We found significant isolation by distance, and significant genetic differentiation both among sampling plots and among trees. Landscape configuration, i.e. the effect of a large open area separating two forested regions, did not leave a traceable pattern in genetic structure, as assessed with partial Mantel tests and analysis of molecular variance. Gene pools were spatially intermingled in the pasture-woodland landscape, as determined by Bayesian analysis of population structure. Evidence for local gene flow was found in a disturbed area that was mainly colonized from nearby sources. Our analyses indicated high rates of gene flow of L. pulmonaria among forest patches, which may reflect the historical connectedness of the landscape through gene movement. These results support the conclusion that dispersal in L. pulmonaria is rather effective, but not spatially unrestricted.

摘要

附生植物受到其宿主树木种群动态的强烈影响。由于宿主树木种群的时空动态变化,种群要在景观中持续存在就需要有相当高的扩散率——这与高水平的基因流相对应。然而,有研究表明几种附生地衣存在扩散限制,这导致人们预期在景观尺度上基因流水平较低。在此,我们研究一种被认为存在扩散限制的附生地衣——肺衣(Lobaria pulmonaria)的景观水平遗传结构和基因流。基于从一个牧场 - 林地景观中的41个样地收集的923个叶状体,并在六个真菌微卫星位点进行基因分型,我们在三个层次水平上对肺衣的遗传结构进行了量化。我们发现存在显著的距离隔离,并且在采样样地之间和树木之间都存在显著的遗传分化。通过部分Mantel检验和分子方差分析评估发现,景观格局,即一个大的开阔区域分隔两个森林区域的影响,在遗传结构中并未留下可追溯的模式。通过贝叶斯种群结构分析确定,在牧场 - 林地景观中基因库在空间上相互混合。在一个主要由附近来源定殖的受干扰区域发现了局部基因流的证据。我们的分析表明肺衣在森林斑块之间的基因流速率很高,这可能反映了该景观通过基因移动形成的历史连通性。这些结果支持了这样的结论:肺衣的扩散相当有效,但并非在空间上不受限制。

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