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对北美家族进行的全基因组扫描显示,特发性震颤与6号染色体p23区域存在遗传连锁。

Genomewide scans in North American families reveal genetic linkage of essential tremor to a region on chromosome 6p23.

作者信息

Shatunov Alexey, Sambuughin Nyamkhishig, Jankovic Joseph, Elble Rodger, Lee Hee Suk, Singleton Andrew B, Dagvadorj Ayush, Ji Jay, Zhang Yiping, Kimonis Virginia E, Hardy John, Hallett Mark, Goldfarb Lev G

机构信息

National Institute of Neurological Disorders and Stroke, National Institutes of Health, Bethesda, MD 20892-9404, USA.

出版信息

Brain. 2006 Sep;129(Pt 9):2318-31. doi: 10.1093/brain/awl120. Epub 2006 May 15.

Abstract

Essential tremor (ET) is the most prevalent adult-onset movement disorder showing evidence of non-random accumulation in some families. ET has previously been mapped to genetic loci on chromosomes 2p and 3q, but no causative genes identified. We conducted genomewide linkage screening with subsequent fine mapping in seven large North American families comprising a total of 325 genotyped individuals that included 65 patients diagnosed as definite ET. Linkage analysis was based on methodology implemented in SimWalk2 and LINKAGE programs. A multigenerational family revealed suggestive linkage to a locus on chromosome 6p23 with maximal nonparametric linkage (NPL) multipoint score 3.281 (P = 0.0005) and parametric multipoint log of the odds (LOD) score 2.983. A second family showed positive linkage to the same 6p23 region with a maximal NPL score 2.125 (P = 0.0075) and LOD score 1.265. Haplotype analysis led to the identification of a 600 kb interval shared by both families. Sequencing of coding regions of 15 genes located in the linked region detected numerous sequence variants, some of them predicting a change of the encoded amino acid, but each was also found in controls. Our findings provide evidence for linkage to a novel susceptibility locus on chromosome 6p23. Analysis of additional ET-affected families is needed to confirm linkage and identify the underlying gene.

摘要

特发性震颤(ET)是最常见的成人起病的运动障碍,在一些家族中显示出非随机聚集的证据。ET此前已被定位到2号染色体短臂和3号染色体长臂上的基因座,但尚未鉴定出致病基因。我们对7个北美大家族进行了全基因组连锁筛查及后续精细定位,这些家族共有325名进行了基因分型的个体,其中包括65名被诊断为明确ET的患者。连锁分析基于SimWalk2和LINKAGE程序中实施的方法。一个多代家族显示与6号染色体短臂23区的一个基因座存在提示性连锁,最大非参数连锁(NPL)多点得分3.281(P = 0.0005),参数多点对数优势(LOD)得分2.983。第二个家族显示与同一6号染色体短臂23区存在阳性连锁,最大NPL得分2.125(P = 0.0075),LOD得分1.265。单倍型分析导致鉴定出两个家族共有的一个600 kb区间。对位于连锁区域的15个基因的编码区进行测序,检测到许多序列变异,其中一些预测编码氨基酸会发生变化,但在对照中也发现了这些变异。我们的研究结果为与6号染色体短臂23区一个新的易感基因座的连锁提供了证据。需要对更多受ET影响的家族进行分析,以确认连锁并鉴定潜在基因。

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