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酿酒酵母中ELC1对RNA聚合酶II多聚泛素化及响应DNA损伤时降解的需求

Requirement of ELC1 for RNA polymerase II polyubiquitylation and degradation in response to DNA damage in Saccharomyces cerevisiae.

作者信息

Ribar Balazs, Prakash Louise, Prakash Satya

机构信息

Sealy Center for Molecular Science, University of Texas Medical Branch at Galveston, Galveston, TX 77555-1061, USA.

出版信息

Mol Cell Biol. 2006 Jun;26(11):3999-4005. doi: 10.1128/MCB.00293-06.

DOI:10.1128/MCB.00293-06
PMID:16705154
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC1489084/
Abstract

Treatment of Saccharomyces cerevisiae and human cells with DNA-damaging agents such as UV light or 4-nitroquinoline-1-oxide induces polyubiquitylation of the largest RNA polymerase II (Pol II) subunit, Rpb1, which results in rapid Pol II degradation by the proteasome. Here we identify a novel role for the yeast Elc1 protein in mediating Pol II polyubiquitylation and degradation in DNA-damaged yeast cells and propose the involvement of a ubiquitin ligase, of which Elc1 is a component, in this process. In addition, we present genetic evidence for a possible involvement of Elc1 in Rad7-Rad16-dependent nucleotide excision repair (NER) of lesions from the nontranscribed regions of the genome and suggest a role for Elc1 in increasing the proficiency of repair of nontranscribed DNA, where as a component of the Rad7-Rad16-Elc1 ubiquitin ligase, it would promote the efficient turnover of the NER ensemble from the lesion site in a Rad23-19S proteasomal complex-dependent reaction.

摘要

用紫外线或4-硝基喹啉-1-氧化物等DNA损伤剂处理酿酒酵母和人类细胞,会诱导最大的RNA聚合酶II(Pol II)亚基Rpb1发生多聚泛素化,进而导致Pol II被蛋白酶体快速降解。我们在此确定了酵母Elc1蛋白在介导DNA损伤的酵母细胞中Pol II多聚泛素化和降解过程中的新作用,并提出在此过程中有一种泛素连接酶(Elc1是其组成部分)参与其中。此外,我们提供了遗传学证据,表明Elc1可能参与了基因组非转录区域损伤的Rad7-Rad16依赖性核苷酸切除修复(NER),并提出Elc1在提高非转录DNA修复效率中发挥作用,作为Rad7-Rad16-Elc1泛素连接酶的组成部分,它会在依赖Rad23-19S蛋白酶体复合物的反应中促进NER组件从损伤位点的有效周转。

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本文引用的文献

1
Rad23 stabilizes Rad4 from degradation by the Ub/proteasome pathway.Rad23可防止Rad4被泛素/蛋白酶体途径降解,从而使其稳定。
Nucleic Acids Res. 2004 Dec 15;32(22):6490-500. doi: 10.1093/nar/gkh987. Print 2004.
2
The HECT E3 ubiquitin ligase Rsp5 is important for ubiquitin homeostasis in yeast.HECT E3泛素连接酶Rsp5对酵母中的泛素稳态至关重要。
FEBS Lett. 2004 Nov 5;577(1-2):215-9. doi: 10.1016/j.febslet.2004.10.006.
3
The NEF4 complex regulates Rad4 levels and utilizes Snf2/Swi2-related ATPase activity for nucleotide excision repair.NEF4复合物调节Rad4水平,并利用与Snf2/Swi2相关的ATP酶活性进行核苷酸切除修复。
Mol Cell Biol. 2004 Jul;24(14):6362-78. doi: 10.1128/MCB.24.14.6362-6378.2004.
4
Rpb4 and Rpb9 mediate subpathways of transcription-coupled DNA repair in Saccharomyces cerevisiae.Rpb4和Rpb9介导酿酒酵母中转录偶联DNA修复的子途径。
EMBO J. 2002 Nov 1;21(21):5921-9. doi: 10.1093/emboj/cdf589.
5
A Rad26-Def1 complex coordinates repair and RNA pol II proteolysis in response to DNA damage.Rad26-Def1复合物在DNA损伤反应中协调修复与RNA聚合酶II的蛋白水解过程。
Nature. 2002 Feb 21;415(6874):929-33. doi: 10.1038/415929a.
6
Activation of HIF1alpha ubiquitination by a reconstituted von Hippel-Lindau (VHL) tumor suppressor complex.通过重组的希佩尔-林道(VHL)肿瘤抑制复合物激活HIF1α泛素化。
Proc Natl Acad Sci U S A. 2000 Sep 12;97(19):10430-5. doi: 10.1073/pnas.190332597.
7
Nucleotide excision repair in yeast.酵母中的核苷酸切除修复
Mutat Res. 2000 Jun 30;451(1-2):13-24. doi: 10.1016/s0027-5107(00)00037-3.
8
Rsp5 ubiquitin-protein ligase mediates DNA damage-induced degradation of the large subunit of RNA polymerase II in Saccharomyces cerevisiae.Rsp5泛素蛋白连接酶介导酿酒酵母中DNA损伤诱导的RNA聚合酶II大亚基的降解。
Mol Cell Biol. 1999 Oct;19(10):6972-9. doi: 10.1128/MCB.19.10.6972.
9
The 19S regulatory complex of the proteasome functions independently of proteolysis in nucleotide excision repair.蛋白酶体的19S调节复合体在核苷酸切除修复中独立于蛋白水解发挥作用。
Mol Cell. 1999 Jun;3(6):687-95. doi: 10.1016/s1097-2765(01)80001-0.
10
Rbx1, a component of the VHL tumor suppressor complex and SCF ubiquitin ligase.Rbx1,一种VHL肿瘤抑制复合物和SCF泛素连接酶的组成成分。
Science. 1999 Apr 23;284(5414):657-61. doi: 10.1126/science.284.5414.657.