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4号染色体亨廷顿病区域黏粒克隆的定位

Mapping of cosmid clones in Huntington's disease region of chromosome 4.

作者信息

Whaley W L, Bates G P, Novelletto A, Sedlacek Z, Cheng S, Romano D, Ormondroyd E, Allitto B, Lin C, Youngman S

机构信息

Neurogenetics Laboratory, Massachusetts General Hospital, Boston 02114.

出版信息

Somat Cell Mol Genet. 1991 Jan;17(1):83-91. doi: 10.1007/BF01233207.

DOI:10.1007/BF01233207
PMID:1671801
Abstract

Huntington's disease (HD) is tightly linked to genetic markers in 4p16.3. We have used a regional somatic cell hybrid mapping panel to isolate and map 25 cosmids to the proximal portion of 4p16.3 and 17 cosmids to the distal portion. The latter were positioned by long-range restriction mapping relative to previously mapped markers. One cosmid, L6 (D4S166), spans the critical breakpoint in the mapping panel that distinguishes proximal and distal 4p16.3. Four of the cosmids mapped distal to D4S90, the previous terminal marker on 4p, and stretched to within 75 kb of the telomere. Several of the cosmids that mapped between L6 and D4S90 were clustered near a number of previously isolated clones in a region with many NotI sites. Cosmid E4 (D4S168) was localized immediately proximal to the one remaining gap in the long-range restriction map of distal 4p16.3. Although pulsed field gel mapping with E4 failed to link the two segments of the map, the intervening gap was excluded as a potential site for the HD gene by genetic analysis.

摘要

亨廷顿舞蹈病(HD)与4p16.3区域的遗传标记紧密连锁。我们利用一个区域体细胞杂种定位板,将25个黏粒分离并定位到4p16.3的近端部分,17个黏粒定位到远端部分。后者通过相对于先前定位标记的长距离限制性图谱定位。一个黏粒L6(D4S166)跨越定位板中的关键断点,该断点区分了4p16.3的近端和远端。在4p上先前的末端标记D4S90远端定位的4个黏粒,延伸到距端粒75 kb范围内。在L6和D4S90之间定位的几个黏粒聚集在一个有许多NotI位点的区域中一些先前分离的克隆附近。黏粒E4(D4S168)定位在4p16.3远端长距离限制性图谱中剩下的一个间隙的紧邻近端位置。尽管用E4进行脉冲场凝胶图谱分析未能连接图谱的两个片段,但通过遗传分析排除了中间间隙作为HD基因潜在位点的可能性。

相似文献

1
Mapping of cosmid clones in Huntington's disease region of chromosome 4.4号染色体亨廷顿病区域黏粒克隆的定位
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A new DNA marker (D4S90) is located terminally on the short arm of chromosome 4, close to the Huntington disease gene.一种新的DNA标记(D4S90)位于4号染色体短臂的末端,靠近亨廷顿舞蹈症基因。
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引用本文的文献

1
Regional differences in the compaction of chromatin in human G0/G1 interphase nuclei.人类G0/G1间期细胞核中染色质压缩的区域差异。
Chromosome Res. 1997 May;5(3):157-66. doi: 10.1023/a:1018438729203.
2
Evidence for the organization of chromatin in megabase pair-sized loops arranged along a random walk path in the human G0/G1 interphase nucleus.在人类G0/G1间期细胞核中,染色质以沿随机游走路径排列的兆碱基对大小的环的形式存在的证据。
J Cell Biol. 1995 Sep;130(6):1239-49. doi: 10.1083/jcb.130.6.1239.
3
The end in sight for Huntington disease?亨廷顿舞蹈症有望终结?
Am J Hum Genet. 1991 Jul;49(1):1-6.
4
The direct screening of cosmid libraries with YAC clones.用酵母人工染色体(YAC)克隆对黏粒文库进行直接筛选。
Nucleic Acids Res. 1991 Dec 11;19(23):6651. doi: 10.1093/nar/19.23.6651.
5
Complex patterns of linkage disequilibrium in the Huntington disease region.亨廷顿病区域连锁不平衡的复杂模式。
Am J Hum Genet. 1991 Oct;49(4):723-34.
6
Significant linkage disequilibrium between the Huntington disease gene and the loci D4S10 and D4S95 in the Dutch population.在荷兰人群中,亨廷顿舞蹈症基因与D4S10和D4S95基因座之间存在显著的连锁不平衡。
Am J Hum Genet. 1992 Oct;51(4):730-5.
7
Molecular definition of the smallest region of deletion overlap in the Wolf-Hirschhorn syndrome.Wolf-Hirschhorn综合征中缺失重叠最小区域的分子定义。
Am J Hum Genet. 1992 Sep;51(3):571-8.
8
Recombination of 4p16 DNA markers in an unusual family with Huntington disease.亨廷顿病一个特殊家系中4p16 DNA标记的重组
Am J Hum Genet. 1992 Jun;50(6):1218-30.
9
Isolation and characterization of new highly polymorphic DNA markers from the Huntington disease region.从亨廷顿病区域分离并鉴定新型高度多态性DNA标记
Am J Hum Genet. 1992 Feb;50(2):382-93.