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从亨廷顿病区域分离并鉴定新型高度多态性DNA标记

Isolation and characterization of new highly polymorphic DNA markers from the Huntington disease region.

作者信息

Weber B, Hedrick A, Andrew S, Riess O, Collins C, Kowbel D, Hayden M R

机构信息

Department of Medical Genetics, University of British Columbia, Vancouver, Canada.

出版信息

Am J Hum Genet. 1992 Feb;50(2):382-93.

PMID:1346482
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC1682470/
Abstract

The defect causing Huntington disease (HD) has been mapped to 4p16.3, distal to the DNA marker D4S10. Subsequently, additional polymorphic markers closer to the HD gene have been isolated, which has led to the establishment of predictive testing programs for individuals at risk for HD. Approximately 17% of persons presenting to the Canadian collaborative study for predictive testing for HD have not received any modification of risk, in part because of limited informativeness of currently available DNA markers. Therefore, more highly polymorphic DNA markers are needed, which will further increase the accuracy and availability of predictive testing, specifically for families with complex or incomplete pedigree structures. In addition, new markers are urgently needed in order to refine the breakpoints in the few known recombinant HD chromosomes, which could allow a more accurate localization of the HD gene within 4p16.3 and, therefore, accelerate the cloning of the disease gene. In this study we present the identification and characterization of nine new polymorphic DNA markers, including three markers which detect highly informative multiallelic VNTR-like polymorphisms with PIC values of up to .84. These markers have been isolated from a cloned region of DNA which has been previously mapped approximately 1,000 kb from the 4p telomere.

摘要

导致亨廷顿舞蹈病(HD)的缺陷基因已被定位于4p16.3,位于DNA标记D4S10的远端。随后,又分离出了一些更靠近HD基因的多态性标记,这使得针对有HD风险的个体建立了预测性检测项目。在参与加拿大HD预测性检测合作研究的人群中,约17%的人并未因检测而改变其风险评估,部分原因是目前可用的DNA标记信息量有限。因此,需要更多高度多态的DNA标记,这将进一步提高预测性检测的准确性和可用性,特别是对于那些系谱结构复杂或不完整的家庭。此外,迫切需要新的标记来完善少数已知重组HD染色体上的断点,这将有助于更精确地将HD基因定位在4p16.3内,从而加速疾病基因的克隆。在本研究中,我们展示了9个新的多态性DNA标记的鉴定和特征,其中包括3个能检测到信息高度丰富的多等位基因VNTR样多态性的标记,其PIC值高达0.84。这些标记是从一个DNA克隆区域中分离出来的,该区域先前已被定位在距离4p端粒约1000 kb处。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/40dd/1682470/edc115310f92/ajhg00073-0148-a.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/40dd/1682470/e3d5b65607db/ajhg00073-0149-a.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/40dd/1682470/23f05e3b0b96/ajhg00073-0144-a.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/40dd/1682470/4117a5606e05/ajhg00073-0145-a.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/40dd/1682470/edc115310f92/ajhg00073-0148-a.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/40dd/1682470/e3d5b65607db/ajhg00073-0149-a.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/40dd/1682470/23f05e3b0b96/ajhg00073-0144-a.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/40dd/1682470/4117a5606e05/ajhg00073-0145-a.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/40dd/1682470/edc115310f92/ajhg00073-0148-a.jpg

相似文献

1
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Evidence from family studies that the gene causing Huntington disease is telomeric to D4S95 and D4S90.家族研究的证据表明,导致亨廷顿舞蹈症的基因位于D4S95和D4S90的端粒位置。
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引用本文的文献

1
Presymptomatic testing for huntington diseases: Recommendations for counseling.亨廷顿病的症状前检测:咨询建议
J Genet Couns. 1992 Dec;1(4):277-302. doi: 10.1007/BF00962825.
2
Somatic stability in chorionic villi samples and other Huntington fetal tissues.绒毛膜绒毛样本及其他亨廷顿病胎儿组织中的体细胞稳定性。
Hum Genet. 1995 Aug;96(2):229-32. doi: 10.1007/BF00207386.

本文引用的文献

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Subregional assignment of the linked marker G8 (D4S10) for Huntington disease to chromosome 4p16.1-16.3.亨廷顿病相关标记G8(D4S10)在4号染色体p16.1 - 16.3区域的亚定位
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New approach for isolation of VNTR markers.分离可变数目串联重复序列(VNTR)标记的新方法。
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