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利用质谱法通过“完整”的小酸溶性蛋白质(SASP)的质量和序列快速区分炭疽芽孢杆菌与蜡样芽孢杆菌群的其他成员。

Rapid discrimination of Bacillus anthracis from other members of the B. cereus group by mass and sequence of "intact" small acid soluble proteins (SASPs) using mass spectrometry.

作者信息

Castanha Elisangela R, Fox Alvin, Fox Karen F

机构信息

Department of Pathology, Microbiology and Immunology, University of South Carolina School of Medicine, Columbia, SC 29208, United States.

出版信息

J Microbiol Methods. 2006 Nov;67(2):230-40. doi: 10.1016/j.mimet.2006.03.024. Epub 2006 May 26.

Abstract

The intentional contamination of buildings, e.g. anthrax in the bioterrorism attacks of 2001, demonstrated that the population can be affected rapidly and lethally if the appropriate treatment is not provided at the right time. Molecular approaches, primarily involving PCR, have proved useful in characterizing "white powders" used in these attacks as well as isolated organisms. However there is a need for a simpler approach, which does not involve temperamental reagents (e.g. enzymes and primers) which could potentially be used by first responders. It is demonstrated here that small acid-soluble proteins (SASPs), located in the core region of Bacillus spores, are reliable biomarkers for identification. The general strategy used in this study was to measure the molecular weight (MW) of an intact SASP by electrospray ionization mass spectrometry (ESI MS) followed by generation of sequence-specific information by ESI MS/MS (tandem mass spectrometry). A prominent SASP of mass 6679 was present in all B. anthracis strains. For B. cereus and B. thuringiensis strains the SASP had a mass of 6712. This represents a two amino acid substitution (serine to alanine; phenylalanine to tyrosine). The only SASP present in the B. anthracis genome consistent with this sequence is encoded by the gene ssB. This protein has a predicted mass of 6810, presumably post-translational processing leads to loss of methionine (mass 131) generating a SASP of mass 6679. This study showed that intact SASPs can be used as a biomarker for identification of B. anthracis; the protocol is simple and rapid. Extrapolation of this approach might prove important for real-time biodetection.

摘要

建筑物的故意污染,例如2001年生物恐怖袭击中的炭疽,表明如果不能及时提供适当治疗,民众可能会迅速受到致命影响。分子方法,主要是聚合酶链反应(PCR),已被证明有助于鉴定这些袭击中使用的“白色粉末”以及分离出的生物。然而,需要一种更简单的方法,这种方法不涉及可能被急救人员利用的不稳定试剂(如酶和引物)。本文证明,位于芽孢杆菌孢子核心区域的小酸溶性蛋白质(SASP)是可靠的鉴定生物标志物。本研究采用的一般策略是通过电喷雾电离质谱(ESI MS)测量完整SASP的分子量(MW),然后通过ESI MS/MS(串联质谱)生成序列特异性信息。所有炭疽芽孢杆菌菌株中都存在一种质量为6679的显著SASP。对于蜡状芽孢杆菌和苏云金芽孢杆菌菌株,该SASP的质量为6712。这代表了两个氨基酸的替换(丝氨酸替换为丙氨酸;苯丙氨酸替换为酪氨酸)。炭疽芽孢杆菌基因组中与该序列一致的唯一SASP由基因ssB编码。该蛋白质的预测质量为6810,推测翻译后加工导致甲硫氨酸(质量为131)丢失,产生质量为6679的SASP。本研究表明,完整的SASP可作为鉴定炭疽芽孢杆菌的生物标志物;该方案简单快速。这种方法的推断可能对实时生物检测很重要。

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