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使用重组蛋白进行DNA检测。

DNA detection using recombination proteins.

作者信息

Piepenburg Olaf, Williams Colin H, Stemple Derek L, Armes Niall A

机构信息

ASM Scientific Ltd, Cambridge, United Kingdom.

出版信息

PLoS Biol. 2006 Jul;4(7):e204. doi: 10.1371/journal.pbio.0040204.

DOI:10.1371/journal.pbio.0040204
PMID:16756388
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC1475771/
Abstract

DNA amplification is essential to most nucleic acid testing strategies, but established techniques require sophisticated equipment or complex experimental procedures, and their uptake outside specialised laboratories has been limited. Our novel approach, recombinase polymerase amplification (RPA), couples isothermal recombinase-driven primer targeting of template material with strand-displacement DNA synthesis. It achieves exponential amplification with no need for pretreatment of sample DNA. Reactions are sensitive, specific, and rapid and operate at constant low temperature. We have also developed a probe-based detection system. Key aspects of the combined RPA amplification/detection process are illustrated by a test for the pathogen methicillin-resistant Staphylococcus aureus. The technology proves to be sensitive to fewer than ten copies of genomic DNA. Furthermore, products can be detected in a simple sandwich assay, thereby establishing an instrument-free DNA testing system. This unique combination of properties is a significant advance in the development of portable and widely accessible nucleic acid-based tests.

摘要

DNA扩增对大多数核酸检测策略至关重要,但现有技术需要精密设备或复杂的实验程序,且在专业实验室之外的应用受限。我们的新方法——重组酶聚合酶扩增(RPA),将等温重组酶驱动的模板材料引物靶向与链置换DNA合成相结合。它无需对样品DNA进行预处理即可实现指数扩增。反应灵敏、特异、快速,且在恒定低温下进行。我们还开发了一种基于探针的检测系统。耐甲氧西林金黄色葡萄球菌病原体检测展示了RPA扩增/检测联合过程的关键方面。该技术对少于十个基因组DNA拷贝敏感。此外,可在简单的夹心检测中检测产物,从而建立了无需仪器的DNA检测系统。这些独特的特性组合是便携式且广泛可用的基于核酸检测开发的重大进展。

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DNA detection using recombination proteins.使用重组蛋白进行DNA检测。
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2
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New Fpg probe chemistry for direct detection of recombinase polymerase amplification on lateral flow strips.用于在侧向流动条上直接检测重组酶聚合酶扩增的新型Fpg探针化学方法。
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本文引用的文献

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New real-time PCR assay for rapid detection of methicillin-resistant Staphylococcus aureus directly from specimens containing a mixture of staphylococci.用于直接从含有葡萄球菌混合物的标本中快速检测耐甲氧西林金黄色葡萄球菌的新型实时聚合酶链反应检测法。
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ENZYMATIC SYNTHESIS OF DEOXYRIBONUCLEIC ACID. XV. PURIFICATION AND PROPERTIES OF A POLYMERASE FROM BACILLUS SUBTILIS.脱氧核糖核酸的酶促合成。十五。枯草芽孢杆菌中一种聚合酶的纯化及性质
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The evolutionary history of methicillin-resistant Staphylococcus aureus (MRSA).
数字微流控中的核酸扩增检测:下一代即时诊断的前景。
Microsyst Nanoeng. 2025 Aug 18;11(1):155. doi: 10.1038/s41378-025-00977-5.
4
The concentration of single-stranded DNA-binding proteins is a critical factor in recombinase polymerase amplification (RPA), as revealed by insights from an open-source system.正如一个开源系统所揭示的那样,单链DNA结合蛋白的浓度是重组酶聚合酶扩增(RPA)中的一个关键因素。
PeerJ. 2025 Aug 13;13:e19758. doi: 10.7717/peerj.19758. eCollection 2025.
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Point-of-need one-pot multiplexed RT-LAMP test for detecting three common respiratory viruses in saliva.用于检测唾液中三种常见呼吸道病毒的即时即用型一锅法多重逆转录环介导等温扩增检测
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A streamlined CRISPR-based test for tuberculosis detection directly from sputum.一种基于CRISPR的简化检测方法,可直接从痰液中检测结核病。
Sci Adv. 2025 Aug 8;11(32):eadx2067. doi: 10.1126/sciadv.adx2067. Epub 2025 Aug 6.
7
Advancing in ovo egg sexing through molecular sex identification of chick embryos using LAMP and RPA assays.通过使用环介导等温扩增(LAMP)和重组酶聚合酶扩增(RPA)检测法对鸡胚进行分子性别鉴定来推进禽蛋在孵化前的性别鉴定。
Sci Rep. 2025 Jul 29;15(1):27722. doi: 10.1038/s41598-025-13013-3.
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Simplified Loop-Mediated Isothermal Amplification-Based Method for Point-of-Care Detection of in Low-Resource Settings.基于简化环介导等温扩增法在资源匮乏地区进行即时检测
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Progress in the application of isothermal amplification technology in the diagnosis of infectious diseases.等温扩增技术在传染病诊断中的应用进展
Front Microbiol. 2025 Jul 4;16:1601644. doi: 10.3389/fmicb.2025.1601644. eCollection 2025.
耐甲氧西林金黄色葡萄球菌(MRSA)的进化史。
Proc Natl Acad Sci U S A. 2002 May 28;99(11):7687-92. doi: 10.1073/pnas.122108599.
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DNA strand exchange proteins: a biochemical and physical comparison.DNA链交换蛋白:生化与物理比较
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Quantification of low-copy transcripts by continuous SYBR Green I monitoring during amplification.在扩增过程中通过连续监测SYBR Green I对低拷贝转录本进行定量分析。
Biotechniques. 1998 Jun;24(6):954-8, 960, 962.
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Purification and some of the functions of the products of bacteriophage T4 recombination genes, uvsX and uvsY.噬菌体T4重组基因uvsX和uvsY产物的纯化及其某些功能
Eur J Biochem. 1985 Apr 1;148(1):127-34. doi: 10.1111/j.1432-1033.1985.tb08816.x.
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Formation of D loops by the UvsX protein of T4 bacteriophage: a comparison of the reaction catalyzed in the presence or absence of gene 32 protein.T4噬菌体UvsX蛋白形成D环:基因32蛋白存在与否时催化反应的比较
Biochemistry. 1988 Sep 6;27(18):6954-9. doi: 10.1021/bi00418a042.
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Purification and characterization of the T4 bacteriophage uvsX protein.T4噬菌体uvsX蛋白的纯化与特性分析
J Biol Chem. 1986 May 5;261(13):6107-18.
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UvsY protein of bacteriophage T4 is an accessory protein for in vitro catalysis of strand exchange.噬菌体T4的UvsY蛋白是链交换体外催化的辅助蛋白。
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Homogeneous Escherichia coli endonuclease IV. Characterization of an enzyme that recognizes oxidative damage in DNA.同源大肠杆菌核酸内切酶IV。一种识别DNA氧化损伤的酶的特性
J Biol Chem. 1988 Jun 15;263(17):8066-71.