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能量转导:质子通过呼吸复合体的转移。

Energy transduction: proton transfer through the respiratory complexes.

作者信息

Hosler Jonathan P, Ferguson-Miller Shelagh, Mills Denise A

机构信息

Department of Biochemistry, University of Mississippi Medical Center, Jackson, Mississippi 39216, USA.

出版信息

Annu Rev Biochem. 2006;75:165-87. doi: 10.1146/annurev.biochem.75.062003.101730.

DOI:10.1146/annurev.biochem.75.062003.101730
PMID:16756489
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC2659341/
Abstract

A series of metalloprotein complexes embedded in a mitochondrial or bacterial membrane utilize electron transfer reactions to pump protons across the membrane and create an electrochemical potential (DeltamuH+). Current understanding of the principles of electron-driven proton transfer is discussed, mainly with respect to the wealth of knowledge available from studies of cytochrome c oxidase. Structural, experimental, and theoretical evidence supports the model of long-distance proton transfer via hydrogen-bonded water chains in proteins as well as the basic concept that proton uptake and release in a redox-driven pump are driven by charge changes at the membrane-embedded centers. Key elements in the pumping mechanism may include bound water, carboxylates, and the heme propionates, arginines, and associated water above the hemes. There is evidence for an important role of subunit III and proton backflow, but the number and nature of gating mechanisms remain elusive, as does the mechanism of physiological control of efficiency.

摘要

一系列嵌入线粒体或细菌膜中的金属蛋白复合物利用电子转移反应将质子泵过膜,从而产生电化学势(ΔμH⁺)。本文主要结合细胞色素c氧化酶研究中丰富的知识,探讨了目前对电子驱动质子转移原理的理解。结构、实验和理论证据支持了通过蛋白质中氢键连接的水链进行长距离质子转移的模型,以及氧化还原驱动泵中质子摄取和释放由膜嵌入中心的电荷变化驱动这一基本概念。泵浦机制中的关键元素可能包括结合水、羧酸盐、血红素丙酸酯、精氨酸以及血红素上方的相关水。有证据表明亚基III和质子回流起着重要作用,但门控机制的数量和性质仍然难以捉摸,效率的生理控制机制也是如此。

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本文引用的文献

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Thermodynamic properties of internal water molecules in the hydrophobic cavity around the catalytic center of cytochrome c oxidase.细胞色素c氧化酶催化中心周围疏水腔内水分子的热力学性质。
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A mechanistic principle for proton pumping by cytochrome c oxidase.细胞色素c氧化酶质子泵浦的机制原理。
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Water chain formation and possible proton pumping routes in Rhodobacter sphaeroides cytochrome c oxidase: a molecular dynamics comparison of the wild type and R481K mutant.球形红杆菌细胞色素c氧化酶中的水链形成及可能的质子泵浦途径:野生型与R481K突变体的分子动力学比较
Biochemistry. 2005 Aug 9;44(31):10475-85. doi: 10.1021/bi0502902.
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The protonation state of a heme propionate controls electron transfer in cytochrome c oxidase.血红素丙酸酯的质子化状态控制细胞色素c氧化酶中的电子转移。
Biochemistry. 2005 Aug 9;44(31):10466-74. doi: 10.1021/bi0502745.
6
An arginine to lysine mutation in the vicinity of the heme propionates affects the redox potentials of the hemes and associated electron and proton transfer in cytochrome c oxidase.血红素丙酸酯附近的精氨酸突变为赖氨酸会影响细胞色素c氧化酶中血红素的氧化还原电位以及相关的电子和质子转移。
Biochemistry. 2005 Aug 9;44(31):10457-65. doi: 10.1021/bi050283d.
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Computer simulation of explicit proton translocation in cytochrome c oxidase: the D-pathway.细胞色素c氧化酶中质子直接转运的计算机模拟:D途径
Proc Natl Acad Sci U S A. 2005 May 10;102(19):6795-800. doi: 10.1073/pnas.0408117102. Epub 2005 Apr 27.
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Fixing the Q cycle.修复Q循环
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Slow proton transfer through the pathways for pumped protons in cytochrome c oxidase induces suicide inactivation of the enzyme.质子通过细胞色素c氧化酶中质子泵出途径的缓慢转移会导致该酶的自杀性失活。
Biochemistry. 2005 Mar 29;44(12):4656-66. doi: 10.1021/bi0475774.