• 文献检索
  • 文档翻译
  • 深度研究
  • 学术资讯
  • Suppr Zotero 插件Zotero 插件
  • 邀请有礼
  • 套餐&价格
  • 历史记录
应用&插件
Suppr Zotero 插件Zotero 插件浏览器插件Mac 客户端Windows 客户端微信小程序
定价
高级版会员购买积分包购买API积分包
服务
文献检索文档翻译深度研究API 文档MCP 服务
关于我们
关于 Suppr公司介绍联系我们用户协议隐私条款
关注我们

Suppr 超能文献

核心技术专利:CN118964589B侵权必究
粤ICP备2023148730 号-1Suppr @ 2026

文献检索

告别复杂PubMed语法,用中文像聊天一样搜索,搜遍4000万医学文献。AI智能推荐,让科研检索更轻松。

立即免费搜索

文件翻译

保留排版,准确专业,支持PDF/Word/PPT等文件格式,支持 12+语言互译。

免费翻译文档

深度研究

AI帮你快速写综述,25分钟生成高质量综述,智能提取关键信息,辅助科研写作。

立即免费体验

可变剪接与RNA选择压力——真核生物基因组的进化后果

Alternative splicing and RNA selection pressure--evolutionary consequences for eukaryotic genomes.

作者信息

Xing Yi, Lee Christopher

机构信息

Molecular Biology Institute, Center for Genomics and Proteomics, Department of Chemistry and Biochemistry, University of California, Los Angeles, California 90095, USA.

出版信息

Nat Rev Genet. 2006 Jul;7(7):499-509. doi: 10.1038/nrg1896. Epub 2006 Jun 13.

DOI:10.1038/nrg1896
PMID:16770337
Abstract

Genome-wide analyses of alternative splicing have established its nearly ubiquitous role in gene regulation in many organisms. Genome sequencing and comparative genomics have made it possible to look in detail at the evolutionary history of specific alternative exons or splice sites, resulting in a flurry of publications in recent years. Here, we consider how alternative splicing has contributed to the evolution of modern genomes, and discuss constraints on evolution associated with alternative splicing that might have important medical implications.

摘要

对可变剪接的全基因组分析已证实其在许多生物体的基因调控中几乎无处不在。基因组测序和比较基因组学使详细研究特定可变外显子或剪接位点的进化历史成为可能,这导致近年来涌现出大量相关出版物。在此,我们探讨可变剪接如何促进现代基因组的进化,并讨论与可变剪接相关的进化限制,这些限制可能具有重要的医学意义。

相似文献

1
Alternative splicing and RNA selection pressure--evolutionary consequences for eukaryotic genomes.可变剪接与RNA选择压力——真核生物基因组的进化后果
Nat Rev Genet. 2006 Jul;7(7):499-509. doi: 10.1038/nrg1896. Epub 2006 Jun 13.
2
Alternative splicing in the human, mouse and rat genomes is associated with an increased frequency of exon creation and/or loss.人类、小鼠和大鼠基因组中的可变剪接与外显子产生和/或丢失频率的增加有关。
Nat Genet. 2003 Jun;34(2):177-80. doi: 10.1038/ng1159.
3
Changes in alternative splicing of human and mouse genes are accompanied by faster evolution of constitutive exons.人类和小鼠基因可变剪接的变化伴随着组成型外显子更快的进化。
Mol Biol Evol. 2005 Nov;22(11):2198-208. doi: 10.1093/molbev/msi218. Epub 2005 Jul 27.
4
Does distance matter? Variations in alternative 3' splicing regulation.距离重要吗?可变3'剪接调控的变化
Nucleic Acids Res. 2007;35(16):5487-98. doi: 10.1093/nar/gkm603. Epub 2007 Aug 17.
5
EuSplice: a unified resource for the analysis of splice signals and alternative splicing in eukaryotic genes.EuSplice:用于分析真核基因剪接信号和可变剪接的统一资源。
Bioinformatics. 2007 Jul 15;23(14):1815-23. doi: 10.1093/bioinformatics/btm084. Epub 2007 Mar 7.
6
Coevolution of genomic intron number and splice sites.基因组内含子数量与剪接位点的共同进化。
Trends Genet. 2007 Jul;23(7):321-5. doi: 10.1016/j.tig.2007.04.001. Epub 2007 Apr 18.
7
How did alternative splicing evolve?可变剪接是如何进化的?
Nat Rev Genet. 2004 Oct;5(10):773-82. doi: 10.1038/nrg1451.
8
Conserved and species-specific alternative splicing in mammalian genomes.哺乳动物基因组中保守的和物种特异性的可变剪接
BMC Evol Biol. 2007 Dec 22;7:249. doi: 10.1186/1471-2148-7-249.
9
Comparative genomics and the study of evolution by natural selection.比较基因组学与自然选择驱动的进化研究。
Mol Ecol. 2008 Nov;17(21):4586-96. doi: 10.1111/j.1365-294X.2008.03954.x.
10
Genome-wide analyses of alternative splicing in plants: opportunities and challenges.植物中可变剪接的全基因组分析:机遇与挑战
Genome Res. 2008 Sep;18(9):1381-92. doi: 10.1101/gr.053678.106. Epub 2008 Jul 30.

引用本文的文献

1
The Role of Alternative Splicing in Marine-Freshwater Divergence in Threespine Stickleback.可变剪接在三刺鱼海洋-淡水分化中的作用
Genome Biol Evol. 2025 May 30;17(6). doi: 10.1093/gbe/evaf105.
2
Genome-Wide Identification of Alternative Splicing in During Infection Stage of .在[具体物种]感染阶段的可变剪接的全基因组鉴定
Microorganisms. 2025 Feb 7;13(2):360. doi: 10.3390/microorganisms13020360.
3
Transcriptome analysis of two isolates of the tomato pathogen Cladosporium fulvum, uncovers genome-wide patterns of alternative splicing during a host infection cycle.
番茄病原菌fulvum两个分离株的转录组分析揭示了宿主感染周期中全基因组范围内的可变剪接模式。
PLoS Pathog. 2024 Dec 18;20(12):e1012791. doi: 10.1371/journal.ppat.1012791. eCollection 2024 Dec.
4
The roles of different gene expression regulators in acoustic variation in the intermediate horseshoe bat revealed by long-read and short-read RNA sequencing data.长读长和短读长RNA测序数据揭示不同基因表达调节因子在中菊头蝠声学变异中的作用
Curr Zool. 2023 Sep 30;70(5):575-588. doi: 10.1093/cz/zoad045. eCollection 2024 Oct.
5
A hybrid approach of ensemble learning and grey wolf optimizer for DNA splice junction prediction.基于集成学习和灰狼优化算法的混合方法进行 DNA 剪接位点预测。
PLoS One. 2024 Sep 23;19(9):e0310698. doi: 10.1371/journal.pone.0310698. eCollection 2024.
6
The Role of mRNA Alternative Splicing in Macrophages Infected with : A Field Needing to Be Discovered.mRNA可变剪接在感染的巨噬细胞中的作用:一个有待探索的领域。 (你提供的原文中“infected with”后面缺少具体内容)
Molecules. 2024 Apr 16;29(8):1798. doi: 10.3390/molecules29081798.
7
Nucleotide-level distance metrics to quantify alternative splicing implemented in TranD.TranD 中实现的用于量化可变剪接的核苷酸水平距离度量。
Nucleic Acids Res. 2024 Mar 21;52(5):e28. doi: 10.1093/nar/gkae056.
8
The ENCODE4 long-read RNA-seq collection reveals distinct classes of transcript structure diversity.ENCODE4长读长RNA测序数据集揭示了不同类别的转录本结构多样性。
bioRxiv. 2023 May 16:2023.05.15.540865. doi: 10.1101/2023.05.15.540865.
9
Splicing complexity as a pivotal feature of alternative exons in mammalian species.剪接复杂性作为哺乳动物物种中可变外显子的关键特征。
BMC Genomics. 2023 Apr 12;24(1):198. doi: 10.1186/s12864-023-09247-y.
10
Combining genetic constraint with predictions of alternative splicing to prioritize deleterious splicing in rare disease studies.结合遗传约束和选择性剪接预测,优先考虑罕见病研究中的有害剪接。
BMC Bioinformatics. 2022 Nov 14;23(1):482. doi: 10.1186/s12859-022-05041-x.