Choi Jeong-Yun, Zang Hong, Angel Karen C, Kozekov Ivan D, Goodenough Angela K, Rizzo Carmelo J, Guengerich F Peter
Department of Biochemistry and Chemistry, Vanderbilt University, Nashville, Tennessee 37232-0146, USA.
Chem Res Toxicol. 2006 Jun;19(6):879-86. doi: 10.1021/tx060051v.
1,N(2)-Etheno(epsilon)guanine (epsilon) is formed in DNA as a result of exposure to certain vinyl monomers (e.g., vinyl chloride) or from lipid peroxidation. This lesion has been shown to be mutagenic in bacteria and mammalian cells. 1,N(2)-epsilon-G has been shown to block several model replicative DNA polymerases (pols), with limited bypass. Recently, an archebacterial DNA pol, Sulfolobus solfataricus Dpo4, has been shown to copy past 1,N(2)-epsilon-G. In this study, we examined the abilities of recombinant, full-length human pol delta and three human translesion DNA pols to copy past 1,N(2)-epsilon-G. The replicative pol, pol delta, was completely blocked. Pols iota and kappa showed similar rates of incorporation of dTTP and dCTP. Pol eta was clearly the most active of these pols in copying past 1,N(2)-epsilon-G, incorporating in the order dGTP > dATP > dCTP, regardless of whether the base 5' of 1,N(2)-epsilon-G in the template was C or T. Pol eta also had the highest error frequency opposite 1,N(2)-epsilon-G. Analysis of the extended products of the pol eta reactions by mass spectrometry indicated only two products, both of which had G incorporated opposite 1,N(2)-epsilon-G and all other base pairing being normal (i.e., G:C and A:T). One-half of the products contained an additional A at the 3'-end, presumably arising from a noninformational blunt end addition or possibly a slipped insertion mechanism at the end of the primer-template replication process. In summary, the most efficient of the four human DNA pols was pol eta, which appeared to insert G opposite 1,N(2)-epsilon-G and then copy correctly. This pattern differs with the same oligonucleotide sequences and 1,N(2)-epsilon-G observed using Dpo4, emphasizing the importance of pols in mutagenesis events.
1,N(2)-乙烯基鸟嘌呤(ε)是由于暴露于某些乙烯基单体(如氯乙烯)或脂质过氧化作用而在DNA中形成的。这种损伤已被证明在细菌和哺乳动物细胞中具有致突变性。1,N(2)-ε-G已被证明会阻断几种模型复制性DNA聚合酶(pol),其绕过能力有限。最近,一种古细菌DNA聚合酶,嗜热栖热菌Dpo4,已被证明能够复制通过1,N(2)-ε-G。在本研究中,我们检测了重组全长人pol δ和三种人跨损伤DNA聚合酶复制通过1,N(2)-ε-G的能力。复制性聚合酶pol δ完全被阻断。聚合酶ι和κ显示出相似的dTTP和dCTP掺入率。在复制通过1,N(2)-ε-G时,聚合酶η显然是这些聚合酶中最活跃的,其掺入顺序为dGTP > dATP > dCTP,无论模板中1,N(2)-ε-G的5'端碱基是C还是T。聚合酶η在1,N(2)-ε-G对面的错误频率也最高。通过质谱分析聚合酶η反应的延伸产物表明只有两种产物,两者在1,N(2)-ε-G对面都掺入了G,并且所有其他碱基配对都是正常的(即G:C和A:T)。一半的产物在3'端含有一个额外的A,推测是由于非信息性平端添加或可能是引物-模板复制过程结束时的滑入插入机制产生的。总之,四种人DNA聚合酶中最有效的是聚合酶η,它似乎在1,N(2)-ε-G对面插入G然后正确复制。这种模式与使用Dpo4观察到的相同寡核苷酸序列和1,N(2)-ε-G不同,强调了聚合酶在诱变事件中的重要性。