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酵母和小鼠RNA:假尿苷合酶1(Pus1p)对tRNA的一种先前未被识别的活性。

A previously unidentified activity of yeast and mouse RNA:pseudouridine synthases 1 (Pus1p) on tRNAs.

作者信息

Behm-Ansmant Isabelle, Massenet Séverine, Immel Françoise, Patton Jeffrey R, Motorin Yuri, Branlant Christiane

机构信息

Laboratoire de Maturation des ARN et Enzymologie Moléculaire, UMR 7567 CNRS-UHP, Nancy I, Faculté des Sciences, BP 239, 54506 Vandoeuvre-les-Nancy Cedex, France.

出版信息

RNA. 2006 Aug;12(8):1583-93. doi: 10.1261/rna.100806. Epub 2006 Jun 27.

DOI:10.1261/rna.100806
PMID:16804160
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC1524882/
Abstract

Mouse pseudouridine synthase 1 (mPus1p) was the first vertebrate RNA:pseudouridine synthase that was cloned and characterized biochemically. The mPus1p was previously found to catalyze Psi formation at positions 27, 28, 34, and 36 in in vitro produced yeast and human tRNAs. On the other hand, the homologous Saccharomyces cerevisiae scPus1p protein was shown to modify seven uridine residues in tRNAs (26, 27, 28, 34, 36, 65, and 67) and U44 in U2 snRNA. In this work, we expressed mPus1p in yeast cells lacking scPus1p and studied modification of U2 snRNA and several yeast tRNAs. Our data showed that, in these in vivo conditions, the mouse enzyme efficiently modifies yeast U2 snRNA at position 44 and tRNAs at positions 27, 28, 34, and 36. However, a tRNA:Psi26-synthase activity of mPus1p was not observed. Furthermore, we found that both scPus1p and mPus1p, in vivo and in vitro, have a previously unidentified activity at position 1 in cytoplasmic tRNAArg(ACG). This modification can take place in mature tRNA, as well as in pre-tRNAs with 5' and/or 3' extensions. Thus, we identified the protein carrying one of the last missing yeast tRNA:Psi synthase activities. In addition, our results reveal an additional activity of mPus1p at position 30 in tRNA that scPus1p does not possess.

摘要

小鼠假尿苷合酶1(mPus1p)是首个被克隆并进行生化特性鉴定的脊椎动物RNA:假尿苷合酶。此前发现mPus1p可在体外产生的酵母和人tRNA中的第27、28、34和36位催化假尿苷(Ψ)的形成。另一方面,已表明同源的酿酒酵母scPus1p蛋白可修饰tRNA中的七个尿苷残基(26、27、28、34、36、65和67)以及U2 snRNA中的U44。在本研究中,我们在缺乏scPus1p的酵母细胞中表达mPus1p,并研究U2 snRNA和几种酵母tRNA的修饰情况。我们的数据表明,在这些体内条件下,小鼠酶可有效修饰酵母U2 snRNA的第44位以及tRNA的第27、28、34和36位。然而,未观察到mPus1p的tRNA:Ψ26合酶活性。此外,我们发现scPus1p和mPus1p在体内和体外对细胞质tRNAArg(ACG)的第1位均具有一种此前未被鉴定的活性。这种修饰可发生在成熟tRNA以及具有5'和/或3'延伸的前体tRNA中。因此,我们鉴定出了具有酵母tRNA:Ψ合酶最后缺失活性之一的蛋白。此外,我们的结果揭示了mPus1p在tRNA第30位具有一种scPus1p所不具备的额外活性。

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Mitochondrial myopathy, sideroblastic anemia, and lactic acidosis: an autosomal recessive syndrome in Persian Jews caused by a mutation in the PUS1 gene.线粒体肌病、铁粒幼细胞贫血和乳酸性酸中毒:一种由PUS1基因突变引起的波斯犹太人常染色体隐性综合征。
J Child Neurol. 2005 May;20(5):449-52. doi: 10.1177/08830738050200051301.
2
Pseudouridylation of yeast U2 snRNA is catalyzed by either an RNA-guided or RNA-independent mechanism.酵母U2小核仁RNA的假尿苷酸化由RNA引导机制或RNA非依赖机制催化。
EMBO J. 2005 Jul 6;24(13):2403-13. doi: 10.1038/sj.emboj.7600718. Epub 2005 Jun 16.
3
Mitochondrial myopathy and sideroblastic anemia (MLASA): missense mutation in the pseudouridine synthase 1 (PUS1) gene is associated with the loss of tRNA pseudouridylation.线粒体肌病和铁粒幼细胞贫血(MLASA):假尿苷合酶1(PUS1)基因中的错义突变与tRNA假尿苷化缺失有关。
J Biol Chem. 2005 May 20;280(20):19823-8. doi: 10.1074/jbc.M500216200. Epub 2005 Mar 16.
4
Pseudouridylation at position 32 of mitochondrial and cytoplasmic tRNAs requires two distinct enzymes in Saccharomyces cerevisiae.在酿酒酵母中,线粒体和细胞质转运核糖核酸(tRNA)第32位的假尿苷化需要两种不同的酶。
J Biol Chem. 2004 Dec 17;279(51):52998-3006. doi: 10.1074/jbc.M409581200. Epub 2004 Oct 4.
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