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蛋白质核磁共振中的无细胞表达与选择性同位素标记

Cell-free expression and selective isotope labelling in protein NMR.

作者信息

Staunton David, Schlinkert Robin, Zanetti Giulia, Colebrook Simon A, Campbell Iain D

机构信息

Department of Biochemistry, University of Oxford, South Parks Rd, Oxford OX1 3QU, UK.

出版信息

Magn Reson Chem. 2006 Jul;44 Spec No:S2-9. doi: 10.1002/mrc.1835.

Abstract

Isotope labelling is a very powerful tool in NMR studies of proteins and has been employed in various ways for over 40 years. 15N and 13C incorporation, using recombinant expression systems, is now commonplace because heteronuclear experiments assist with the fundamental problems of peak resolution and assignment. The use of selective labelling for peak assignment has been restricted by the scrambling of isotope label through metabolic pathways within the expression host organism. The availability of efficient cell-free expression systems with low levels of metabolic conversion allow the increasing use of selective isotope labelling as a tool in protein NMR. We describe two examples, one where a selective labelling scheme can identify backbone amide peaks from unassigned 1H--15N HSQC and HNCO spectra of a 84 residue protein, and another where a specific backbone amide in a 198 residue construct of the ninth and tenth Type III repeats from human fibronectin can be labelled and rapidly identified using a simple HSQC experiment.

摘要

同位素标记是蛋白质核磁共振(NMR)研究中一种非常强大的工具,40多年来已被广泛应用于各种研究中。利用重组表达系统掺入¹⁵N和¹³C,如今已很常见,因为异核实验有助于解决峰分辨率和归属这两个基本问题。由于表达宿主生物体内代谢途径会导致同位素标记发生重排,选择性标记用于峰归属的应用受到了限制。高效的无细胞表达系统,其代谢转化率较低,使得选择性同位素标记作为蛋白质NMR的一种工具得到越来越多的应用。我们描述了两个例子,一个例子是选择性标记方案能够从一个84个残基的蛋白质未归属的¹H-¹⁵N HSQC和HNCO谱中识别出主链酰胺峰;另一个例子是,利用简单的HSQC实验,可以对人纤连蛋白第九和第十个III型重复序列的198个残基构建体中的一个特定主链酰胺进行标记并快速识别。

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