Suppr超能文献

气相和溶液中五元氮杂环互变异构平衡的理论研究。

Theoretical studies of the tautomeric equilibria for five-member N-heterocycles in the gas phase and in solution.

作者信息

Nagy Peter I, Tejada Frederick R, Messer William S

机构信息

Center for Drug Design and Development, The University of Toledo, Toledo, Ohio 43606-3390, USA.

出版信息

J Phys Chem B. 2005 Dec 1;109(47):22588-602. doi: 10.1021/jp053076w.

Abstract

Tautomeric equilibria have been studied for five-member N-heterocycles and their methyl derivatives in the gas phase and in different solvents with dielectric constants of epsilon = 4.7-78.4. The free energy changes differently for tautomers upon solvation as compared to the gas phase, resulting in a shift of the equilibrium constant in solution. Solvents with increasing dielectric constant produce more negative solute-solvent interaction energies and increasing internal energies. The methyl-substituted imidazole and pyrrazole form delicate equilibria between two tautomeric forms. Depending on the solvent, the methyl-substituted triazoles and tetrazole have one or two major tautomers in solution. When estimating the relative solvation free energies by means of an explicit solvent model and using the FEP/MC method, one observes that the preferred tautomers differ in several cases from those predicted by the continuum solvent model. The 1,2-prototropic shift, as an intramolecular tautomerization path, requires about 50 kcal/mol activation energy for imidazole in the gas phase, and this route is also disfavored in a solution. The calculated activation free energy along the intramolecular path is 48-50 kcal/mol in chloroform and water as compared to a literature value of 13.6 kcal/mol for pyrrazole in DMSO. A molecular dynamics computer experiment favors the formation of an imidazole chain in chloroform, making the 1,3-tautomerization feasible along an intermolecular path in nonprotic solvents. In aqueous solution, one strong N-H...Ow hydrogen bond is formed for each species, whereas all other nitrogens in the ring form weaker, N...HwOw type hydrogen bonds. The tetrahydrofuran solvent acts as a hydrogen bond acceptor and forms N-H... Oether bonds. Molecules of the dichloromethane solvent are in favorable dipole-dipole interactions with the solute. The results obtained are useful in the design of N-heterocyclic ligands forming specified hydrogen bonds with protein side chains.

摘要

已在气相以及介电常数ε = 4.7 - 78.4的不同溶剂中研究了五元氮杂环及其甲基衍生物的互变异构平衡。与气相相比,互变异构体在溶剂化时的自由能变化不同,导致溶液中平衡常数发生偏移。介电常数增加的溶剂会产生更负的溶质 - 溶剂相互作用能和增加的内能。甲基取代的咪唑和吡唑在两种互变异构形式之间形成微妙的平衡。根据溶剂的不同,甲基取代的三唑和四唑在溶液中有一种或两种主要的互变异构体。当通过显式溶剂模型并使用FEP/MC方法估算相对溶剂化自由能时,人们观察到在几种情况下,优选的互变异构体与连续介质溶剂模型预测的不同。作为分子内互变异构化途径的1,2 - 质子转移,在气相中咪唑需要约50 kcal/mol的活化能,并且该途径在溶液中也不利。与二甲基亚砜中吡唑的文献值13.6 kcal/mol相比,在氯仿和水中沿分子内途径计算的活化自由能为48 - 50 kcal/mol。分子动力学计算机实验有利于在氯仿中形成咪唑链,使得在非质子溶剂中沿分子间途径进行1,3 - 互变异构化成为可能。在水溶液中,每种物质形成一个强的N - H...Ow氢键,而环中的所有其他氮形成较弱的N...HwOw型氢键。四氢呋喃溶剂充当氢键受体并形成N - H... O醚键。二氯甲烷溶剂分子与溶质存在有利的偶极 - 偶极相互作用。所得结果对于设计与蛋白质侧链形成特定氢键的氮杂环配体很有用。

文献AI研究员

20分钟写一篇综述,助力文献阅读效率提升50倍。

立即体验

用中文搜PubMed

大模型驱动的PubMed中文搜索引擎

马上搜索

文档翻译

学术文献翻译模型,支持多种主流文档格式。

立即体验