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胚胎干细胞蛋白质组学

Embryonic stem cell proteomics.

作者信息

Van Hoof Dennis, Mummery Christine L, Heck Albert J R, Krijgsveld Jeroen

机构信息

Netherlands Institute of Developmental Biology, Hubrecht Laboratory, Uppsalalaan 8, 3584 CT Utrecht, The Netherlands.

出版信息

Expert Rev Proteomics. 2006 Aug;3(4):427-37. doi: 10.1586/14789450.3.4.427.

DOI:10.1586/14789450.3.4.427
PMID:16901201
Abstract

Human embryonic stem cells potentially represent an unlimited source of cells and tissues for regenerative medicine. Understanding signaling events that drive proliferation and specialization of these cells into various differentiated derivatives is of utmost importance for controlling their behavior in vitro. Major progress has been made in unraveling these signaling events with large-scale studies at the transcriptional level, but analysis of protein expression, interaction and modification has been more limited, since it requires different strategies. Recent advances in mass spectrometry-based proteomics indicate that proteome characterization can contribute significantly to our understanding of embryonic stem cell biology. In this article, we review mass spectrometry-based studies of human and mouse embryonic stem cells and their differentiated progeny, as well as studies of conditioned media that have been reported to support self-renewal of the undifferentiated cells in the absence of the more commonly used feeder cells. In addition, we make concise comparisons with related transcriptome profiling reports.

摘要

人类胚胎干细胞可能为再生医学提供无限的细胞和组织来源。了解驱动这些细胞增殖并分化为各种不同衍生物的信号事件,对于在体外控制它们的行为至关重要。在转录水平进行的大规模研究在揭示这些信号事件方面取得了重大进展,但蛋白质表达、相互作用和修饰的分析则较为有限,因为这需要不同的策略。基于质谱的蛋白质组学的最新进展表明,蛋白质组表征能够极大地促进我们对胚胎干细胞生物学的理解。在本文中,我们综述了基于质谱对人类和小鼠胚胎干细胞及其分化后代的研究,以及对条件培养基的研究,这些条件培养基据报道在没有更常用的饲养细胞的情况下能够支持未分化细胞的自我更新。此外,我们还与相关的转录组分析报告进行了简要比较。

相似文献

1
Embryonic stem cell proteomics.胚胎干细胞蛋白质组学
Expert Rev Proteomics. 2006 Aug;3(4):427-37. doi: 10.1586/14789450.3.4.427.
2
Identification of potential pluripotency determinants for human embryonic stem cells following proteomic analysis of human and mouse fibroblast conditioned media.对人和小鼠成纤维细胞条件培养基进行蛋白质组学分析后,鉴定人类胚胎干细胞潜在的多能性决定因素。
J Proteome Res. 2007 Sep;6(9):3796-807. doi: 10.1021/pr0702262. Epub 2007 Jul 27.
3
Proteome analysis of conditioned medium from mouse embryonic fibroblast feeder layers which support the growth of human embryonic stem cells.支持人类胚胎干细胞生长的小鼠胚胎成纤维细胞饲养层条件培养基的蛋白质组分析。
Proteomics. 2002 Sep;2(9):1187-203. doi: 10.1002/1615-9861(200209)2:9<1187::AID-PROT1187>3.0.CO;2-T.
4
Role of TGFbeta and myofibroblasts in supporting the propagation of human embryonic stem cells in vitro.转化生长因子β(TGFβ)和成肌纤维细胞在支持人胚胎干细胞体外增殖中的作用
Int J Dev Biol. 2010;54(8-9):1329-36. doi: 10.1387/ijdb.092854nk.
5
Proteome analysis of the culture environment supporting undifferentiated mouse embryonic stem and germ cell growth.支持未分化小鼠胚胎干细胞和生殖细胞生长的培养环境的蛋白质组分析。
Electrophoresis. 2007 May;28(10):1615-23. doi: 10.1002/elps.200600497.
6
Mouse embryonic stem cell-derived feeder cells support the growth of their own mouse embryonic stem cells.小鼠胚胎干细胞衍生的饲养层细胞支持其自身小鼠胚胎干细胞的生长。
Cell Biol Int. 2006 Dec;30(12):1041-7. doi: 10.1016/j.cellbi.2006.08.003. Epub 2006 Aug 24.
7
Gene expression profiling of embryonic stem cells leads to greater understanding of pluripotency and early developmental events.胚胎干细胞的基因表达谱分析有助于更深入地了解多能性和早期发育事件。
Biol Reprod. 2004 Dec;71(6):1772-8. doi: 10.1095/biolreprod.104.030395. Epub 2004 May 12.
8
Culture and preparation of human embryonic stem cells for proteomics-based applications.用于基于蛋白质组学应用的人类胚胎干细胞的培养与制备
Methods Mol Biol. 2010;584:151-77. doi: 10.1007/978-1-60761-369-5_9.
9
Comparative proteome and transcriptome analyses of embryonic stem cells during embryoid body-based differentiation.基于拟胚体分化的胚胎干细胞的蛋白质组和转录组比较分析
Proteomics. 2009 Nov;9(21):4859-70. doi: 10.1002/pmic.200900003.
10
FGF2 signaling in mouse embryonic fibroblasts is crucial for self-renewal of embryonic stem cells.小鼠胚胎成纤维细胞中的FGF2信号传导对于胚胎干细胞的自我更新至关重要。
Cells Tissues Organs. 2008;188(1-2):52-61. doi: 10.1159/000121282. Epub 2008 Mar 11.

引用本文的文献

1
Genome-wide profiling of pluripotent cells reveals a unique molecular signature of human embryonic germ cells.多能细胞的全基因组分析揭示了人类胚胎生殖细胞的独特分子特征。
PLoS One. 2012;7(6):e39088. doi: 10.1371/journal.pone.0039088. Epub 2012 Jun 21.
2
Cell-surface proteomics identifies lineage-specific markers of embryo-derived stem cells.细胞表面蛋白质组学鉴定胚胎来源干细胞的谱系特异性标记物。
Dev Cell. 2012 Apr 17;22(4):887-901. doi: 10.1016/j.devcel.2012.01.005. Epub 2012 Mar 15.
3
Proteomics profiling of human embryonic stem cells in the early differentiation stage.
人类胚胎干细胞早期分化阶段的蛋白质组学分析。
Stem Cell Rev Rep. 2012 Mar;8(1):137-49. doi: 10.1007/s12015-011-9286-y.
4
Derivation and characterisation of hESC lines from supernumerary embryos, experience from Odense, Denmark.从多余胚胎中衍生和鉴定人胚胎干细胞系:丹麦欧登塞的经验。
In Vitro Cell Dev Biol Anim. 2010 Apr;46(3-4):259-68. doi: 10.1007/s11626-010-9281-7. Epub 2010 Mar 3.
5
A novel role for proteomics in the discovery of cell-surface markers on stem cells: Scratching the surface.蛋白质组学在发现干细胞表面标志物方面的新作用:深入探究。
Proteomics Clin Appl. 2008 Jun 12;2(6):892-903. doi: 10.1002/prca.200780122.
6
Temporal analysis of neural differentiation using quantitative proteomics.使用定量蛋白质组学对神经分化进行时间分析。
J Proteome Res. 2009 Mar;8(3):1315-26. doi: 10.1021/pr8006667.
7
Stable isotope labeling by amino acids in cell culture (SILAC) and quantitative comparison of the membrane proteomes of self-renewing and differentiating human embryonic stem cells.细胞培养中氨基酸稳定同位素标记法(SILAC)以及自我更新和分化的人类胚胎干细胞膜蛋白质组的定量比较
Mol Cell Proteomics. 2009 May;8(5):959-70. doi: 10.1074/mcp.M800287-MCP200. Epub 2009 Jan 17.
8
Non-invasive imaging of stem cells by scanning ion conductance microscopy: future perspective.通过扫描离子电导显微镜对干细胞进行无创成像:未来展望。
Tissue Eng Part C Methods. 2008 Dec;14(4):311-8. doi: 10.1089/ten.tec.2008.0058.
9
An enhanced mass spectrometry approach reveals human embryonic stem cell growth factors in culture.一种改进的质谱方法揭示了培养中的人类胚胎干细胞生长因子。
Mol Cell Proteomics. 2009 Mar;8(3):421-32. doi: 10.1074/mcp.M800190-MCP200. Epub 2008 Oct 20.
10
Coupled global and targeted proteomics of human embryonic stem cells during induced differentiation.诱导分化过程中人类胚胎干细胞的耦合全局和靶向蛋白质组学
Mol Cell Proteomics. 2008 Apr;7(4):750-67. doi: 10.1074/mcp.M700399-MCP200. Epub 2008 Feb 26.