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鼠伤寒沙门氏菌A类非特异性酸性磷酸酶(PhoN)的蛋白质工程:pH活性曲线的调节

Protein engineering of class-A non-specific acid phosphatase (PhoN) of Salmonella typhimurium: modulation of the pH-activity profile.

作者信息

Makde Ravindra D, Dikshit Krati, Kumar Vinay

机构信息

Synchrotron Radiation Section, Bhabha Atomic Research Centre, Mumbai 400 085, India.

出版信息

Biomol Eng. 2006 Oct;23(5):247-51. doi: 10.1016/j.bioeng.2006.06.004. Epub 2006 Jul 8.

Abstract

Engineering of the PhoN enzyme of Salmonella typhimurium due to its superior characteristics for bioremediation of heavy metals has been advocated by Macaskie and colleagues [Basnakova, G., Stephens, E.R., Thaller, M.C., Rossolini, G.M., Macaskie, L.E., 1998. The use of Escherichia coli bearing a phoN gene for the removal of uranium and nickel from aqueous flows. Appl. Microbiol. Biotechnol. 50, 266-272]. The native enzyme hydrolyzes disparate organophosphates and exhibits optimal phosphatase activity at pH 5.5, for instance, with substrate p-nitrophenyl phosphate. Structurally guided Ile-78 was mutated using site-directed mutagenesis to Ala, Asp and His residues, with an aim to shift the optimum pH of the PhoN enzyme. Encouragingly, the I78A mutant displays significantly higher (as high as 160%) enzymatic efficiency over a broad pH range of 3.0-9.0, compared to the wild-type PhoN. The higher catalytic efficiency is due to the increase in k(cat), and can be mainly attributed to a deshielding of catalytic His-158 from the bulk-solvent. The I78D mutant possesses nearly twice the specific activity at the optimum pH of 7.0. The alkaline shift of the pH-activity profile agrees well with reasoning based on electrostatics. An increase in K(m), however, lowers the catalytic efficiency of the I78D mutant at the optimum pH. The I78H mutant, counter-intuitively, also exhibits an alkaline shift in the pH-optimum. Nonetheless, the active site scaffold in I78H mutant may not be disturbed, as similar steady-state kinetic parameters are observed for both I78H mutant and wild-type PhoN at their respective pH optima.

摘要

由于鼠伤寒沙门氏菌的PhoN酶在重金属生物修复方面具有卓越特性,Macaskie及其同事提倡对其进行工程改造[巴斯纳科娃,G.,斯蒂芬斯,E.R.,萨勒,M.C.,罗索利尼,G.M.,Macaskie,L.E.,1998年。利用携带phoN基因的大肠杆菌从水流中去除铀和镍。应用微生物学与生物技术。50,266 - 272]。天然酶可水解不同的有机磷酸盐,例如,在pH 5.5时对底物对硝基苯磷酸表现出最佳磷酸酶活性。利用定点诱变将结构导向的Ile - 78突变为丙氨酸、天冬氨酸和组氨酸残基,目的是改变PhoN酶的最佳pH值。令人鼓舞的是,与野生型PhoN相比,I78A突变体在3.0 - 9.0的宽pH范围内显示出显著更高(高达160%)的酶效率。更高的催化效率归因于k(cat)的增加,并且主要可归因于催化性His - 158从本体溶剂中的去屏蔽。I78D突变体在最佳pH 7.0时具有近两倍的比活性。pH -活性曲线的碱性偏移与基于静电学的推理非常吻合。然而,K(m)的增加降低了I78D突变体在最佳pH时的催化效率。与直觉相反,I78H突变体在最佳pH时也表现出碱性偏移。尽管如此,I78H突变体中的活性位点支架可能未受干扰,因为在各自的pH最佳值下,I78H突变体和野生型PhoN观察到相似的稳态动力学参数。

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