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PEWY 谷氨酸在细胞色素 bc1 的 Qo 位点对苯二酚 - 醌氧化还原催化中的作用。

Role of the PEWY glutamate in hydroquinone-quinone oxidation-reduction catalysis in the Qo Site of cytochrome bc1.

作者信息

Osyczka Artur, Zhang Haibo, Mathé Christelle, Rich Peter R, Moser Christopher C, Dutton P Leslie

机构信息

Johnson Research Foundation, Department of Biochemistry and Biophysics, University of Pennsylvania, Pennsylvania 19104, USA.

出版信息

Biochemistry. 2006 Sep 5;45(35):10492-503. doi: 10.1021/bi060013a.

Abstract

The glutamic acid residue of the conserved PEWY motif of the Q(o) site of cytochrome bc(1) is widely discussed as central to reversible Q(o) site catalysis of two-electron, two-proton hydroquinone-quinone oxidation-reduction. Extensive mutation of this glutamate (E295) to A, V, F, H, K, and Q in purple photosynthetic Rhodobacter capsulatus results in hydroquinone oxidation rates that are between 5 and 50-fold slower than that in the wild type. However, the mutants show little or no detectable effects on hydroquinone or quinone exchange and binding at the Q(o) site nor on subsequent Q(o) site-mediated redox equilibria in the c-chain and b-chain from pH 5-10. Lack of effects of mutations on the E(m)/pH plots rules out involvement of E295 in the strong electron-proton coupling evident in either the FeS center or heme b(L). These detailed equilibrium and kinetic analyses demonstrate that E295 is not irreplaceable in the Q(o) site catalytic mechanism. Rather, E295 and several other Q(o) site residues that can also be widely varied and still support hydroquinone oxidation illustrate the considerable resilience of Q(o) site activity to mutational change in Q(o) site environs. Residues and water molecules appear to cooperate in providing a physical and chemical environment supporting hydroquinone oxidation rates comparable to those seen in nonprotein aqueous environments at electrodes. We suggest that residues at the Q(o) site (and, possibly, other respiratory and photosynthetic quinone and oxygen binding sites) are a product of natural selection primarily acting not to lower catalytic barriers according to the traditional view of enzymatic catalysis but rather to develop specificity by raising barriers in defense of semiquinone loss or energy wasting short-circuit reactions.

摘要

细胞色素bc1的Q(o)位点保守PEWY基序中的谷氨酸残基,作为双电子、双质子对苯二酚 - 醌氧化还原反应中Q(o)位点可逆催化的核心,受到了广泛讨论。在紫色光合红球菌中,将该谷氨酸(E295)广泛突变为A、V、F、H、K和Q,导致对苯二酚氧化速率比野生型慢5至50倍。然而,这些突变体对Q(o)位点的对苯二酚或醌交换及结合,以及随后在pH 5 - 10的c链和b链中由Q(o)位点介导的氧化还原平衡几乎没有或没有可检测到的影响。突变对E(m)/pH图无影响,排除了E295参与FeS中心或血红素b(L)中明显的强电子 - 质子偶联的可能性。这些详细的平衡和动力学分析表明,E295在Q(o)位点催化机制中并非不可替代。相反,E295和其他几个也可广泛变化但仍支持对苯二酚氧化的Q(o)位点残基,说明了Q(o)位点活性对Q(o)位点环境中突变变化具有相当的适应性。残基和水分子似乎协同提供了一个物理和化学环境,支持与电极上非蛋白质水性环境中相当的对苯二酚氧化速率。我们认为,Q(o)位点的残基(可能还有其他呼吸和光合醌及氧结合位点)是自然选择的产物,主要作用不是按照传统酶催化观点降低催化障碍,而是通过提高障碍来发展特异性,以防止半醌损失或能量浪费的短路反应。

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