Reif Bernd, Xue Yi, Agarwal Vipin, Pavlova Maria S, Hologne Maggy, Diehl Anne, Ryabov Yaroslav E, Skrynnikov Nikolai R
Forschunginstitut für Molekulare Pharmakologie, Robert-Rössle-Str. 10, 13125 Berlin, Germany.
J Am Chem Soc. 2006 Sep 27;128(38):12354-5. doi: 10.1021/ja062808a.
Rapid advances in solid-state MAS NMR made it possible to probe protein dynamics on a per-residue basis, similar to solution experiments. In this work we compare methyl 2H relaxation rates measured in the solid and liquid samples of alpha-spectrin SH3 domain. The solution data are treated using a model-free approach to separate the contributions from the overall molecular tumbling and fast internal motion. The latter part forms the basis for comparison with the solid-state data. Although the accuracy of solid-state measurements is limited by deuterium spin diffusion, the results suggest a significant similarity between methyl dynamics in the two samples. This is a potentially important observation, preparing the ground for combined analysis of the dynamics data by solid- and solution-state NMR.
固态魔角旋转核磁共振技术的快速发展使得在逐个残基的基础上探测蛋白质动力学成为可能,这类似于溶液实验。在这项工作中,我们比较了α-血影蛋白SH3结构域的固体和液体样品中甲基2H的弛豫速率。溶液数据采用无模型方法处理,以分离整体分子翻滚和快速内部运动的贡献。后一部分构成了与固态数据进行比较的基础。尽管固态测量的准确性受到氘自旋扩散的限制,但结果表明两个样品中甲基动力学之间存在显著相似性。这是一个潜在的重要观察结果,为通过固态和溶液态核磁共振对动力学数据进行联合分析奠定了基础。