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古老基因recX的进化途径。

Evolutionary pathways of an ancient gene recX.

作者信息

Lin Jun, Chen Zhong-Zhong, Tian Bing, Hua Yue-Jin

机构信息

Institute of Nuclear-Agricultural Sciences, Zhejiang University, Kaixuan Road 268, Hangzhou 310029, China.

出版信息

Gene. 2007 Jan 31;387(1-2):15-20. doi: 10.1016/j.gene.2006.07.031. Epub 2006 Aug 18.

DOI:10.1016/j.gene.2006.07.031
PMID:16996700
Abstract

RecX is a regulator of RecA activity by interacting with RecA protein or RecA filaments. Genes encoding RecX were found in genomes of a wide diversity of bacteria and some plants (e.g., Arabidopsis thaliana and Oryza sativa). Our comparative genome analysis showed that although members of the RecX family are found in many bacterial species, they are not found in archaea and the only gene found in eukaryotes is likely derived from bacteria genomes. It is therefore proposed that RecX is of bacterial origin, and the gene had presented in the common ancestor of bacteria. Moreover, bacterial RecX and plant RecX domain are homologues, and RecX domain in plants may have derived from bacteria via unknown pathways. Plant RecX-like protein was formed by a gene fusion event between a unique N-terminal domain of unknown origin and RecX domain within plant cells. Finally, three possible evolutionary pathways from bacteria to plant were discussed.

摘要

RecX通过与RecA蛋白或RecA丝相互作用来调节RecA的活性。在各种各样的细菌以及一些植物(如拟南芥和水稻)的基因组中发现了编码RecX的基因。我们的比较基因组分析表明,虽然RecX家族的成员存在于许多细菌物种中,但在古细菌中未发现,而在真核生物中发现的唯一基因可能源自细菌基因组。因此,有人提出RecX起源于细菌,并且该基因存在于细菌的共同祖先中。此外,细菌RecX和植物RecX结构域是同源的,植物中的RecX结构域可能通过未知途径源自细菌。植物类RecX蛋白是由植物细胞内一个未知来源的独特N端结构域与RecX结构域之间的基因融合事件形成的。最后,讨论了从细菌到植物的三种可能进化途径。

相似文献

1
Evolutionary pathways of an ancient gene recX.古老基因recX的进化途径。
Gene. 2007 Jan 31;387(1-2):15-20. doi: 10.1016/j.gene.2006.07.031. Epub 2006 Aug 18.
2
Dual negative regulatory mechanisms of RecX on RecA functions in radiation resistance, DNA recombination and consequent genome instability in Deinococcus radiodurans.RecX对耐辐射球菌中RecA在辐射抗性、DNA重组及由此导致的基因组不稳定性方面功能的双重负调控机制。
DNA Repair (Amst). 2005 Jun 8;4(6):671-8. doi: 10.1016/j.dnarep.2005.02.006.
3
RecX protein abrogates ATP hydrolysis and strand exchange promoted by RecA: insights into negative regulation of homologous recombination.RecX蛋白可消除RecA促进的ATP水解和链交换:对同源重组负调控的见解。
Proc Natl Acad Sci U S A. 2002 Sep 17;99(19):12091-6. doi: 10.1073/pnas.192178999. Epub 2002 Sep 6.
4
Unique genes in plants: specificities and conserved features throughout evolution.植物中的独特基因:进化过程中的特异性和保守特征。
BMC Evol Biol. 2008 Oct 10;8:280. doi: 10.1186/1471-2148-8-280.
5
Molecular modeling of RecX reveals its mode of interaction with RecA.RecX的分子建模揭示了其与RecA的相互作用模式。
Biochem Biophys Res Commun. 2003 Dec 19;312(3):615-22. doi: 10.1016/j.bbrc.2003.10.164.
6
RecX is involved in the switch between DNA damage response and normal metabolism in D. radiodurans.RecX参与了耐辐射球菌中DNA损伤反应与正常代谢之间的转换。
J Biochem. 2009 Sep;146(3):337-42. doi: 10.1093/jb/mvp072. Epub 2009 May 14.
7
Genes of cyanobacterial origin in plant nuclear genomes point to a heterocyst-forming plastid ancestor.植物核基因组中源于蓝细菌的基因指向一个形成异形胞的质体祖先。
Mol Biol Evol. 2008 Apr;25(4):748-61. doi: 10.1093/molbev/msn022. Epub 2008 Jan 24.
8
The recX gene potentiates homologous recombination in Neisseria gonorrhoeae.recX基因增强淋病奈瑟菌中的同源重组。
Mol Microbiol. 2001 Jun;40(6):1301-10. doi: 10.1046/j.1365-2958.2001.02463.x.
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Less is more: Neisseria gonorrhoeae RecX protein stimulates recombination by inhibiting RecA.少即是多:淋病奈瑟菌 RecX 蛋白通过抑制 RecA 促进重组。
J Biol Chem. 2010 Nov 26;285(48):37188-97. doi: 10.1074/jbc.M110.171967. Epub 2010 Sep 17.
10
Loss of DNA recombinational repair enzymes in the initial stages of genome degeneration.基因组退化初始阶段DNA重组修复酶的丧失
Mol Biol Evol. 2003 Aug;20(8):1188-94. doi: 10.1093/molbev/msg138. Epub 2003 May 30.

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