Hanes Jeremiah W, Thal David M, Johnson Kenneth A
Department of Chemistry and Biochemistry, Institute for Cellular and Molecular Biology, The University of Texas, Austin, Texas 78712, USA.
J Biol Chem. 2006 Nov 24;281(47):36241-8. doi: 10.1074/jbc.M607965200. Epub 2006 Sep 27.
To assess the role of oxidative stress on the replication of mitochondrial DNA, we examined the kinetics of incorporation of 8-oxo-7,8-dihydroguanosine (8-oxodG) triphosphate catalyzed by the human mitochondrial DNA polymerase. Using transient state kinetic methods, we quantified the kinetics of incorporation, excision, and extension beyond a base pair containing 8-oxodG. The 8-oxodGTP was incorporated opposite dC in the template with a specificity constant of 0.005 microM(-1) s(-1), a value approximately 10,000-fold lower than that for dGTP. Once incorporated, 96% of the time 8-oxodGMP was extended by continued polymerization rather than being excised by the proofreading exonuclease. The specificity constant for incorporation of 8-oxodGTP opposite a template dA was 0.2 microM(-1) s(-1), a value 13-fold higher than incorporation opposite a template dC. The 8-oxodG:dA mispair was extended rather than excised at least 70% of the time. Examination of the kinetics of polymerization with 8-oxodG in the template strand also revealed relatively low fidelity in that dCTP would be incorporated only 90% of the time. In nearly 10% of events, dATP would be incorporated, and once incorporated dA (opposite 8-oxodG) was extended rather than excised. The greatest fidelity was against a dTTP:8-oxodG mismatch affording a discrimination value of only 1800. These data reveal that 8-oxodGTP is a potent mutagen. Once it is incorporated into DNA, 8-oxodGMP codes for error prone DNA synthesis. These reactions are likely to play important roles in oxidative stress in mitochondria related to aging and as compounded by nucleoside analogs used to treat human immunodeficiency virus infections.
为评估氧化应激在线粒体DNA复制中的作用,我们检测了人线粒体DNA聚合酶催化的8-氧代-7,8-二氢鸟苷三磷酸(8-氧代dG)掺入动力学。采用瞬态动力学方法,我们对含有8-氧代dG的碱基对的掺入、切除及延伸动力学进行了量化。8-氧代dGTP以0.005 μM⁻¹ s⁻¹的特异性常数掺入模板链中的dC对面,该值比dGTP的特异性常数低约10000倍。一旦掺入,96%的情况下8-氧代dGMP会通过持续聚合而延伸,而非被校对核酸外切酶切除。8-氧代dGTP掺入模板链dA对面的特异性常数为0.2 μM⁻¹ s⁻¹,该值比掺入模板链dC对面高13倍。8-氧代dG:dA错配至少70%的情况下会延伸而非切除。对模板链中含有8-氧代dG的聚合动力学研究还显示保真度相对较低,因为dCTP仅在90%的情况下被掺入。在近10%的事件中,dATP会被掺入,且一旦掺入,dA(与8-氧代dG相对)会延伸而非切除。对dTTP:8-氧代dG错配的保真度最高,判别值仅为1800。这些数据表明8-氧代dGTP是一种强效诱变剂。一旦它掺入DNA,8-氧代dGMP编码易错的DNA合成。这些反应可能在与衰老相关的线粒体氧化应激中以及在用于治疗人类免疫缺陷病毒感染的核苷类似物的作用下发挥重要作用。